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Protein

Anaerobic glycerol-3-phosphate dehydrogenase subunit B

Gene

glpB

Organism
Vibrio anguillarum (strain ATCC 68554 / 775) (Listonella anguillarum)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.UniRule annotation

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotationSAAS annotation

Cofactori

FMNUniRule annotationSAAS annotation

Pathwayi: glycerol degradation via glycerol kinase pathway

This protein is involved in step 1 of the subpathway that synthesizes glycerone phosphate from sn-glycerol 3-phosphate (anaerobic route).UniRule annotationSAAS annotation
Proteins known to be involved in this subpathway in this organism are:
  1. Anaerobic glycerol-3-phosphate dehydrogenase subunit B (glpB)
This subpathway is part of the pathway glycerol degradation via glycerol kinase pathway, which is itself part of Polyol metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes glycerone phosphate from sn-glycerol 3-phosphate (anaerobic route), the pathway glycerol degradation via glycerol kinase pathway and in Polyol metabolism.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductaseUniRule annotationSAAS annotation
LigandFlavoprotein, FMNUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciVANG882102:G1GYI-3005-MONOMER
UniPathwayiUPA00618; UER00673

Names & Taxonomyi

Protein namesi
Recommended name:
Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotation (EC:1.1.5.3UniRule annotation)
Short name:
Anaerobic G-3-P dehydrogenase subunit BUniRule annotation
Short name:
Anaerobic G3Pdhase BUniRule annotation
Gene namesi
Name:glpBUniRule annotation
Ordered Locus Names:VAA_01536Imported
OrganismiVibrio anguillarum (strain ATCC 68554 / 775) (Listonella anguillarum)Imported
Taxonomic identifieri882102 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000006800 Componenti: Chromosome II

Interactioni

Subunit structurei

Composed of a catalytic GlpA/B dimer and of membrane bound GlpC.UniRule annotation

Protein-protein interaction databases

STRINGi882102.VAA_01536

Structurei

3D structure databases

ProteinModelPortaliF7YS62
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 410FAD_binding_2InterPro annotationAdd BLAST406

Sequence similaritiesi

Belongs to the anaerobic G-3-P dehydrogenase subunit B family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4108KJ0 Bacteria
COG3075 LUCA
KOiK00112
OMAiVAINAQC
OrthoDBiPOG091H0GYK

Family and domain databases

Gene3Di3.50.50.601 hit
HAMAPiMF_00753 Glycerol3P_GlpB, 1 hit
InterProiView protein in InterPro
IPR003953 FAD-binding_2
IPR036188 FAD/NAD-bd_sf
IPR009158 G3P_DH_GlpB_su
PfamiView protein in Pfam
PF00890 FAD_binding_2, 1 hit
PIRSFiPIRSF000141 Anaerobic_G3P_dh, 1 hit
SUPFAMiSSF51905 SSF51905, 2 hits
TIGRFAMsiTIGR03378 glycerol3P_GlpB, 1 hit

Sequencei

Sequence statusi: Complete.

F7YS62-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMKYDVTIIG GGIAGYSAGL RCLQAGLKTA LISQGQSALH FSSGSIDVLG
60 70 80 90 100
KLPSGEAVES PLLAMEALRQ QAPNHPYSKI GADTILQGLM WFQKTLQQRG
110 120 130 140 150
MPLTHQADNS NHYRITPMGT LKATWLSQPY VYQHKTNADF KRIVLLAIDG
160 170 180 190 200
YRDFQPHMLQ DNLRALPAFS AIPSEIINIT IPGFEALRHN PNELRSIDIA
210 220 230 240 250
RLLKQPHAWR SFCDQLIRHA TVQDLVILPA IMGNGDGLTL LNKLKLETNL
260 270 280 290 300
QLHEVPTMPP SLMGIRIEET LSRAFLTMGG THLKGDKVIS GEFDGNRLTA
310 320 330 340 350
IHTQNLNDMP IQADHFVMAT GSYFSQGLQA SHHGISEPVF QLETESCHDR
360 370 380 390 400
ALWRNHAFFS ANSHPFMTFG VLTNTSLNPT HQGNIITNLY CCGSMLAGYD
410 420 430
PIFEGSGGGV AIASAYHATS QIMAQTQSRP AIQEVLA
Length:437
Mass (Da):47,975
Last modified:September 21, 2011 - v1
Checksum:i750868348DF22298
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002285 Genomic DNA Translation: AEH34575.1
RefSeqiWP_013867919.1, NC_015637.1

Genome annotation databases

EnsemblBacteriaiAEH34575; AEH34575; VAA_01536
GeneIDi10776867
KEGGivan:VAA_01536
PATRICifig|882102.3.peg.3010

Similar proteinsi

Entry informationi

Entry nameiF7YS62_VIBA7
AccessioniPrimary (citable) accession number: F7YS62
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: February 28, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported