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F7YKS3 (F7YKS3_VIBA7) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length208 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. RuleBase RU000544 HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding25 – 328ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding103 – 1064ATP By similarity HAMAP-Rule MF_00124

Sites

Active site1041Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1611Zinc By similarity HAMAP-Rule MF_00124
Metal binding1631Zinc By similarity HAMAP-Rule MF_00124
Metal binding1981Zinc By similarity HAMAP-Rule MF_00124
Metal binding2011Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
F7YKS3 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 51CAA723309640DD

FASTA20823,310
        10         20         30         40         50         60 
MNLVLSPIDL VTGISLLAQM YFYYSAMNAG KSTTLLQSSF NYQERGMTPV IYTAAIDDRY 

        70         80         90        100        110        120 
GVGKVSSRIG LESDAQLFTA ETNLYDEINA LHEQQKRHCI LVDECQFLTK DQVYQLTEVV 

       130        140        150        160        170        180 
DKIGIPVLCY GLRTDFLGEL FEGSKYLLSW ADKLVELKTI CHCGRKANMV IRTDEHGVAI 

       190        200 
AEGDQVSIGG NDKYVSVCRQ HYKEALGK 

« Hide

References

[1]"Complete genome sequence of the marine fish pathogen Vibrio anguillarum harboring the pJM1 virulence plasmid and genomic comparison with other virulent strains of V. anguillarum and V. ordalii."
Naka H., Dias G.M., Thompson C.C., Dubay C., Thompson F.L., Crosa J.H.
Infect. Immun. 79:2889-2900(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 68554 / 775.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002284 Genomic DNA. Translation: AEH33418.1.
RefSeqYP_004566460.1. NC_015633.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH33418; AEH33418; VAA_02154.
GeneID10775662.
KEGGvan:VAA_02154.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycLANG882102:GIWG-1884-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7YKS3_VIBA7
AccessionPrimary (citable) accession number: F7YKS3
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)