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F7YJ73 (F7YJ73_VIBA7) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP-dependent DNA ligase EMBL AEH33208.1
Gene names
ORF Names:VAA_1806 EMBL AEH33208.1
OrganismVibrio anguillarum (strain ATCC 68554 / 775) (Listonella anguillarum) [Complete proteome] [HAMAP] EMBL AEH33208.1
Taxonomic identifier882102 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio ›

Protein attributes

Sequence length288 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEH33208.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F7YJ73 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: DFE6E2C2F397B7BF

FASTA28832,578
        10         20         30         40         50         60 
MIEPDGMQLK LSLLSIALLN TIPVTATENF QMFIPVTAAN SYQHGIDVAE YWKSEKLDGI 

        70         80         90        100        110        120 
RAIWNGQYLH TRNGNKINAP AWFTAPLPNK ALEGELWAGR GQFHHVQQTV LDTIPTDEAW 

       130        140        150        160        170        180 
QSIRFMLFDM PEAIGDYQKR YRNLIHLSSL MNAPHITYIE HSLIHSEKEL LGYLDNVSDG 

       190        200        210        220        230        240 
QGEGVMLRKI NAHYQAGRSN DLLKLKKHQD AEATVIGYKL GSGKYQGMMG SVLVRLENGV 

       250        260        270        280 
EFYIGSGFSD EIRNNPPKIG SIITFRFNDL TAEGKPRFAR FMRERPAI

« Hide

References

[1]"Complete genome sequence of the marine fish pathogen Vibrio anguillarum harboring the pJM1 virulence plasmid and genomic comparison with other virulent strains of V. anguillarum and V. ordalii."
Naka H., Dias G.M., Thompson C.C., Dubay C., Thompson F.L., Crosa J.H.
Infect. Immun. 79:2889-2900(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 68554 / 775.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002284 Genomic DNA. Translation: AEH33208.1.
RefSeqYP_004566250.1. NC_015633.1.

3D structure databases

ProteinModelPortalF7YJ73.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH33208; AEH33208; VAA_1806.
GeneID10775452.
KEGGvan:VAA_1806.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycLANG882102:GIWG-1674-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7YJ73_VIBA7
AccessionPrimary (citable) accession number: F7YJ73
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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