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F7YJ73

- F7YJ73_VIBA7

UniProt

F7YJ73 - F7YJ73_VIBA7

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

VAA_1806

Organism
Vibrio anguillarum (strain ATCC 68554 / 775) (Listonella anguillarum)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciLANG882102:GIWG-1674-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    ORF Names:VAA_1806Imported
    OrganismiVibrio anguillarum (strain ATCC 68554 / 775) (Listonella anguillarum)Imported
    Taxonomic identifieri882102 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000006800: Chromosome I

    Structurei

    3D structure databases

    ProteinModelPortaliF7YJ73.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiGKGQFEN.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F7YJ73-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIEPDGMQLK LSLLSIALLN TIPVTATENF QMFIPVTAAN SYQHGIDVAE    50
    YWKSEKLDGI RAIWNGQYLH TRNGNKINAP AWFTAPLPNK ALEGELWAGR 100
    GQFHHVQQTV LDTIPTDEAW QSIRFMLFDM PEAIGDYQKR YRNLIHLSSL 150
    MNAPHITYIE HSLIHSEKEL LGYLDNVSDG QGEGVMLRKI NAHYQAGRSN 200
    DLLKLKKHQD AEATVIGYKL GSGKYQGMMG SVLVRLENGV EFYIGSGFSD 250
    EIRNNPPKIG SIITFRFNDL TAEGKPRFAR FMRERPAI 288
    Length:288
    Mass (Da):32,578
    Last modified:September 21, 2011 - v1
    Checksum:iDFE6E2C2F397B7BF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002284 Genomic DNA. Translation: AEH33208.1.
    RefSeqiYP_004566250.1. NC_015633.1.

    Genome annotation databases

    EnsemblBacteriaiAEH33208; AEH33208; VAA_1806.
    GeneIDi10775452.
    KEGGivan:VAA_1806.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002284 Genomic DNA. Translation: AEH33208.1 .
    RefSeqi YP_004566250.1. NC_015633.1.

    3D structure databases

    ProteinModelPortali F7YJ73.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEH33208 ; AEH33208 ; VAA_1806 .
    GeneIDi 10775452.
    KEGGi van:VAA_1806.

    Phylogenomic databases

    KOi K01971.
    OMAi GKGQFEN.

    Enzyme and pathway databases

    BioCyci LANG882102:GIWG-1674-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the marine fish pathogen Vibrio anguillarum harboring the pJM1 virulence plasmid and genomic comparison with other virulent strains of V. anguillarum and V. ordalii."
      Naka H., Dias G.M., Thompson C.C., Dubay C., Thompson F.L., Crosa J.H.
      Infect. Immun. 79:2889-2900(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 68554 / 775Imported.

    Entry informationi

    Entry nameiF7YJ73_VIBA7
    AccessioniPrimary (citable) accession number: F7YJ73
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3