F7YIR2 (F7YIR2_VIBA7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase, biosynthetic EMBL AEH34346.1

Gene names

Ordered Locus Names:

VAA_00263 EMBL AEH34346.1

Organism

Vibrio anguillarum (strain ATCC 68554 / 775) (Listonella anguillarum) [Complete proteome] [HAMAP] EMBL AEH34346.1

Taxonomic identifier

882102 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio anguillarum › Listonella anguillarum serovar O1

Protein attributes

Sequence length	360 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase SAAS SAAS020622 RuleBase RU000608
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F7YIR2 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 3A108C6FC071F693	FASTA	360	39,274
	10 20 30 40 50 60 MSYMKAATAC IDLDALKHNL QRVKQQAPNS KIMAVVKANG YGHGLRHVAK HALGADAFGV 70 80 90 100 110 120 ARIEEALQLR ASGVVKPILL LEGFYSPMDL AVLVTNNIQT VVHCEEQLVA LEKAQLDVPV 130 140 150 160 170 180 NVWLKIDSGM HRLGVRPEQY PDFLERLQAC KNVVKPLRYM SHFGCADELD KSTTSEQIEL 190 200 210 220 230 240 FLAMTKGHEG ERSLAASAGL LAWKHSQLEW VRPGIIMYGV SPFDDNSAQA LGYQPVMTLK 250 260 270 280 290 300 SHLIAVRDVK AGESVGYGAT WTSLRDTKVG VIAIGYGDGY PRTAPNGTPV VVNGRKVPIA 310 320 330 340 350 360 GRVSMDMLTV DLGPQACDKV GDEVILWGKE LPAEEVASHI GTIAYELVTK LTSRVEMSYQ

References

[1]

"Complete genome sequence of the marine fish pathogen Vibrio anguillarum harboring the pJM1 virulence plasmid and genomic comparison with other virulent strains of V. anguillarum and V. ordalii." Naka H., Dias G.M., Thompson C.C., Dubay C., Thompson F.L., Crosa J.H. Infect. Immun. 79:2889-2900(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 68554 / 775.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002284 Genomic DNA. Translation: AEH34346.1.
RefSeq	YP_004567388.1. NC_015633.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEH34346; AEH34346; VAA_00263.
GeneID	10776629.
KEGG	van:VAA_00263.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
BioCyc	LANG882102:GIWG-2851-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F7YIR2_VIBA7

Accession

Primary (citable) accession number: F7YIR2

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)