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F7YFC1

- F7YFC1_MESOW

UniProt

F7YFC1 - F7YFC1_MESOW

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Mesop_0077
Organism
Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMOPP536019:GH56-78-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mesop_0077Imported
OrganismiMesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)Imported
Taxonomic identifieri536019 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
ProteomesiUP000001623: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F7YFC1-1 [UniParc]FASTAAdd to Basket

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MNRFAELLDR LVLTPSRNGK LTLLTDYFRS VEDPDRGLAL AAITGDLNIA    50
AIKPAMLRTL VTERMDPVLF GYSYDYVGDL AETVSLVWPQ TSGHIPNREP 100
TLGEVVAKLQ AASRSDGPKI LAGLLDSAGI SSRFAIIKLV TGGLRIGVSA 150
RLAKQALADF GKVDVAEIEE LWHGLSPPYT ALFAWLEGKA DKPHNTALAL 200
FRPVMLSNPI GDGDLEKLDP ADYAAEWKWD GIRVQAVAEG GVRRLYSRTG 250
DDVSGAFPDL ADAMNFSATL DGELLVGDPR EATGTFSDLQ QRLNRKTVTP 300
KMQQQYPAFM RCYDLLQIGG EDLRGLSFRE RRTRLEAFMG TLDPSRFDLS 350
PFVDFTDWQA LEDLRRAPPH PIIEGVMLKR WDSAYVAGRP KGPWFKWKRD 400
PHTVDAVLMY AQRGHGKRSS FYSDYTFGVW SGAEGEEELV PVGKAYFGFT 450
DEELRQIDKY VRDNTVERFG PVRSVRADRD NGLVLEVAFE GLNRSTRHKS 500
GVAMRFPRIS RLRWDKPANE ADRIETLQAL LDR 533
Length:533
Mass (Da):59,628
Last modified:September 21, 2011 - v1
Checksum:i7B7C06AF47EFEDD4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002279 Genomic DNA. Translation: AEH84574.1.
RefSeqiYP_004608668.1. NC_015675.1.

Genome annotation databases

EnsemblBacteriaiAEH84574; AEH84574; Mesop_0077.
GeneIDi10823882.
KEGGimop:Mesop_0077.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002279 Genomic DNA. Translation: AEH84574.1 .
RefSeqi YP_004608668.1. NC_015675.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEH84574 ; AEH84574 ; Mesop_0077 .
GeneIDi 10823882.
KEGGi mop:Mesop_0077.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci MOPP536019:GH56-78-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMG 24607 / HAMBI 3007 / WSM2075.

Entry informationi

Entry nameiF7YFC1_MESOW
AccessioniPrimary (citable) accession number: F7YFC1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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