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F7YFC1

- F7YFC1_MESOW

UniProt

F7YFC1 - F7YFC1_MESOW

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mesop_0077

Organism
Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMOPP536019:GH56-78-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Mesop_0077Imported
    OrganismiMesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)Imported
    Taxonomic identifieri536019 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
    ProteomesiUP000001623: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F7YFC1-1 [UniParc]FASTAAdd to Basket

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    MNRFAELLDR LVLTPSRNGK LTLLTDYFRS VEDPDRGLAL AAITGDLNIA    50
    AIKPAMLRTL VTERMDPVLF GYSYDYVGDL AETVSLVWPQ TSGHIPNREP 100
    TLGEVVAKLQ AASRSDGPKI LAGLLDSAGI SSRFAIIKLV TGGLRIGVSA 150
    RLAKQALADF GKVDVAEIEE LWHGLSPPYT ALFAWLEGKA DKPHNTALAL 200
    FRPVMLSNPI GDGDLEKLDP ADYAAEWKWD GIRVQAVAEG GVRRLYSRTG 250
    DDVSGAFPDL ADAMNFSATL DGELLVGDPR EATGTFSDLQ QRLNRKTVTP 300
    KMQQQYPAFM RCYDLLQIGG EDLRGLSFRE RRTRLEAFMG TLDPSRFDLS 350
    PFVDFTDWQA LEDLRRAPPH PIIEGVMLKR WDSAYVAGRP KGPWFKWKRD 400
    PHTVDAVLMY AQRGHGKRSS FYSDYTFGVW SGAEGEEELV PVGKAYFGFT 450
    DEELRQIDKY VRDNTVERFG PVRSVRADRD NGLVLEVAFE GLNRSTRHKS 500
    GVAMRFPRIS RLRWDKPANE ADRIETLQAL LDR 533
    Length:533
    Mass (Da):59,628
    Last modified:September 21, 2011 - v1
    Checksum:i7B7C06AF47EFEDD4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002279 Genomic DNA. Translation: AEH84574.1.
    RefSeqiYP_004608668.1. NC_015675.1.

    Genome annotation databases

    EnsemblBacteriaiAEH84574; AEH84574; Mesop_0077.
    GeneIDi10823882.
    KEGGimop:Mesop_0077.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002279 Genomic DNA. Translation: AEH84574.1 .
    RefSeqi YP_004608668.1. NC_015675.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEH84574 ; AEH84574 ; Mesop_0077 .
    GeneIDi 10823882.
    KEGGi mop:Mesop_0077.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci MOPP536019:GH56-78-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: LMG 24607 / HAMBI 3007 / WSM2075Imported.

    Entry informationi

    Entry nameiF7YFC1_MESOW
    AccessioniPrimary (citable) accession number: F7YFC1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3