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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mesop_0077

Organism
Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMOPP536019:GH56-78-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mesop_0077Imported
OrganismiMesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)Imported
Taxonomic identifieri536019 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
ProteomesiUP000001623 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi536019.Mesop_0077.

Family & Domainsi

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F7YFC1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRFAELLDR LVLTPSRNGK LTLLTDYFRS VEDPDRGLAL AAITGDLNIA
60 70 80 90 100
AIKPAMLRTL VTERMDPVLF GYSYDYVGDL AETVSLVWPQ TSGHIPNREP
110 120 130 140 150
TLGEVVAKLQ AASRSDGPKI LAGLLDSAGI SSRFAIIKLV TGGLRIGVSA
160 170 180 190 200
RLAKQALADF GKVDVAEIEE LWHGLSPPYT ALFAWLEGKA DKPHNTALAL
210 220 230 240 250
FRPVMLSNPI GDGDLEKLDP ADYAAEWKWD GIRVQAVAEG GVRRLYSRTG
260 270 280 290 300
DDVSGAFPDL ADAMNFSATL DGELLVGDPR EATGTFSDLQ QRLNRKTVTP
310 320 330 340 350
KMQQQYPAFM RCYDLLQIGG EDLRGLSFRE RRTRLEAFMG TLDPSRFDLS
360 370 380 390 400
PFVDFTDWQA LEDLRRAPPH PIIEGVMLKR WDSAYVAGRP KGPWFKWKRD
410 420 430 440 450
PHTVDAVLMY AQRGHGKRSS FYSDYTFGVW SGAEGEEELV PVGKAYFGFT
460 470 480 490 500
DEELRQIDKY VRDNTVERFG PVRSVRADRD NGLVLEVAFE GLNRSTRHKS
510 520 530
GVAMRFPRIS RLRWDKPANE ADRIETLQAL LDR
Length:533
Mass (Da):59,628
Last modified:September 21, 2011 - v1
Checksum:i7B7C06AF47EFEDD4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002279 Genomic DNA. Translation: AEH84574.1.
RefSeqiWP_013891323.1. NC_015675.1.

Genome annotation databases

EnsemblBacteriaiAEH84574; AEH84574; Mesop_0077.
KEGGimop:Mesop_0077.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002279 Genomic DNA. Translation: AEH84574.1.
RefSeqiWP_013891323.1. NC_015675.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi536019.Mesop_0077.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH84574; AEH84574; Mesop_0077.
KEGGimop:Mesop_0077.

Phylogenomic databases

KOiK10747.

Enzyme and pathway databases

BioCyciMOPP536019:GH56-78-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMG 24607 / HAMBI 3007 / WSM2075Imported.

Entry informationi

Entry nameiF7YFC1_MESOW
AccessioniPrimary (citable) accession number: F7YFC1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 22, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.