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F7Y9P4 (F7Y9P4_MESOW) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mesop_4340 EMBL AEH88770.1
OrganismMesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) [Complete proteome] [HAMAP] EMBL AEH88770.1
Taxonomic identifier536019 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium

Protein attributes

Sequence length287 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEH88770.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F7Y9P4 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 235BB530113F0387

FASTA28732,456
        10         20         30         40         50         60 
MPLKFIKPME PELVDTPPQG DEWLHEIKFD GYRTQIIKDE DGIRLFTKNG YDWTGRYIEL 

        70         80         90        100        110        120 
AGEAEAIEAE SFIIDGETIT VNEAGLSDFP ALQSAVTRRK PSRDLYLVAF DLLHLNGHDL 

       130        140        150        160        170        180 
RNMPVEDRRE ILQELIPAVG RIQVSKAMPG TGAAVYSRVD RAGLEGMVSK RKDSVYRSGP 

       190        200        210        220        230        240 
TMNWRKIKCY TEKEMDIIGV QREAGKPAMV LMADKGQYAG GAFVAFKADK RQRLWDRVQG 

       250        260        270        280 
KVGGPPPIGL KKEKAEWLKP GLVGRVRFLK GEEKLRHAKL LDFREET 

« Hide

References

[1]"Complete sequence of Mesorhizobium opportunistum WSM2075."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Misra M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Mavrommatis K.M., Tiwari R.P. expand/collapse author list , Howieson J.G., O'Hara G.W., Nandasena K.G., Woyke T.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LMG 24607 / HAMBI 3007 / WSM2075.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002279 Genomic DNA. Translation: AEH88770.1.
RefSeqYP_004612864.1. NC_015675.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH88770; AEH88770; Mesop_4340.
GeneID10828189.
KEGGmop:Mesop_4340.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycMOPP536019:GH56-4385-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7Y9P4_MESOW
AccessionPrimary (citable) accession number: F7Y9P4
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)