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Protein
Submitted name:

Transcriptional regulator, LuxR family

Gene

Mesop_1970

Organism
Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciMOPP536019:GH56-1998-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LuxR familyImported
Gene namesi
Ordered Locus Names:Mesop_1970Imported
OrganismiMesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)Imported
Taxonomic identifieri536019 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
ProteomesiUP000001623 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF7Y979.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F7Y979-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDVSIRRAD FMMVLAYASD LATGHSRDFA LKSCVLAMRI ATLGGVSDEI
60 70 80 90 100
RRNAYHQSML RYVGCNADTD LLSATFGDEI ALRQDLVGLD MGNRAELGRV
110 120 130 140 150
FVQAFKRVYY DLEPDTQARA IEAAMSQALA VARPVLTAHC EVAQRIGQRL
160 170 180 190 200
GLSEEIRHNL GQIYERWDGK GLPRGLSGED VLPAVRLITL AQDAIALSEA
210 220 230 240 250
VGIEEMAETI ASRADGPYEA DLARLVSANA PALMEGIGAT VDRETILALE
260 270 280 290 300
PDPPVTLDEA GCDEAFLAIA DMIDMRMPLT YGHSRMVAQL AEGAGGQMKL
310 320 330 340 350
PAADLRALRW SGCIHDIGEL VVPVATWMRN GPLSVRERDA AQLHAYYGER
360 370 380 390 400
ALASFGREGE AMAALVLRHH ERLDGSGYHR KVHASDLSPA ARILAAAEAF
410 420 430 440 450
QTSREERPHR RALSSDAAAS QLRAAVREGC ICPDAAEAVL SFAGQPSRRT
460 470 480 490 500
PPRPLAGMTP REIEVLRLIA AGLTAKEAAR KLDISPKTAD HHIQSVYAKI
510 520
GVTTRAAAAL YAVEHGLVRP GETQT
Length:525
Mass (Da):56,722
Last modified:September 20, 2011 - v1
Checksum:i4E970C0193836EDE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002279 Genomic DNA. Translation: AEH86451.1.
RefSeqiYP_004610545.1. NC_015675.1.

Genome annotation databases

EnsemblBacteriaiAEH86451; AEH86451; Mesop_1970.
KEGGimop:Mesop_1970.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002279 Genomic DNA. Translation: AEH86451.1.
RefSeqiYP_004610545.1. NC_015675.1.

3D structure databases

ProteinModelPortaliF7Y979.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH86451; AEH86451; Mesop_1970.
KEGGimop:Mesop_1970.

Enzyme and pathway databases

BioCyciMOPP536019:GH56-1998-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMG 24607 / HAMBI 3007 / WSM2075Imported.

Entry informationi

Entry nameiF7Y979_MESOW
AccessioniPrimary (citable) accession number: F7Y979
Entry historyi
Integrated into UniProtKB/TrEMBL: September 20, 2011
Last sequence update: September 20, 2011
Last modified: March 31, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.