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F7Y979 (F7Y979_MESOW) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mesop_1970 EMBL AEH86451.1
OrganismMesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) [Complete proteome] [HAMAP] EMBL AEH86451.1
Taxonomic identifier536019 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium

Protein attributes

Sequence length525 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Sequences

Sequence LengthMass (Da)Tools
F7Y979 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 4E970C0193836EDE

FASTA52556,722
        10         20         30         40         50         60 
MTDVSIRRAD FMMVLAYASD LATGHSRDFA LKSCVLAMRI ATLGGVSDEI RRNAYHQSML 

        70         80         90        100        110        120 
RYVGCNADTD LLSATFGDEI ALRQDLVGLD MGNRAELGRV FVQAFKRVYY DLEPDTQARA 

       130        140        150        160        170        180 
IEAAMSQALA VARPVLTAHC EVAQRIGQRL GLSEEIRHNL GQIYERWDGK GLPRGLSGED 

       190        200        210        220        230        240 
VLPAVRLITL AQDAIALSEA VGIEEMAETI ASRADGPYEA DLARLVSANA PALMEGIGAT 

       250        260        270        280        290        300 
VDRETILALE PDPPVTLDEA GCDEAFLAIA DMIDMRMPLT YGHSRMVAQL AEGAGGQMKL 

       310        320        330        340        350        360 
PAADLRALRW SGCIHDIGEL VVPVATWMRN GPLSVRERDA AQLHAYYGER ALASFGREGE 

       370        380        390        400        410        420 
AMAALVLRHH ERLDGSGYHR KVHASDLSPA ARILAAAEAF QTSREERPHR RALSSDAAAS 

       430        440        450        460        470        480 
QLRAAVREGC ICPDAAEAVL SFAGQPSRRT PPRPLAGMTP REIEVLRLIA AGLTAKEAAR 

       490        500        510        520 
KLDISPKTAD HHIQSVYAKI GVTTRAAAAL YAVEHGLVRP GETQT 

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References

[1]"Complete sequence of Mesorhizobium opportunistum WSM2075."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Misra M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Mavrommatis K.M., Tiwari R.P. expand/collapse author list , Howieson J.G., O'Hara G.W., Nandasena K.G., Woyke T.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LMG 24607 / HAMBI 3007 / WSM2075.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002279 Genomic DNA. Translation: AEH86451.1.
RefSeqYP_004610545.1. NC_015675.1.

3D structure databases

ProteinModelPortalF7Y979.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH86451; AEH86451; Mesop_1970.
GeneID10825802.
KEGGmop:Mesop_1970.

Organism-specific databases

CMRSearch...

Enzyme and pathway databases

BioCycMOPP536019:GH56-1998-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00196. GerE. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
SMARTSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMSSF46894. SSF46894. 1 hit.
PROSITEPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7Y979_MESOW
AccessionPrimary (citable) accession number: F7Y979
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: February 19, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)