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Protein
Submitted name:

Transcriptional regulator, LuxR family

Gene

Mesop_1970

Organism
Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi475 – 494H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LuxR familyImported
Gene namesi
Ordered Locus Names:Mesop_1970Imported
OrganismiMesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)Imported
Taxonomic identifieri536019 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
Proteomesi
  • UP000001623 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi536019.Mesop_1970.

Structurei

3D structure databases

ProteinModelPortaliF7Y979.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini451 – 516HTH luxR-type DNA-bindingInterPro annotationAdd BLAST66

Phylogenomic databases

eggNOGiENOG4105DHT. Bacteria.
COG2206. LUCA.
COG2771. LUCA.
OrthoDBiPOG091H09F9.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR003607. HD/PDEase_dom.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiView protein in PROSITE
PS50043. HTH_LUXR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

F7Y979-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDVSIRRAD FMMVLAYASD LATGHSRDFA LKSCVLAMRI ATLGGVSDEI
60 70 80 90 100
RRNAYHQSML RYVGCNADTD LLSATFGDEI ALRQDLVGLD MGNRAELGRV
110 120 130 140 150
FVQAFKRVYY DLEPDTQARA IEAAMSQALA VARPVLTAHC EVAQRIGQRL
160 170 180 190 200
GLSEEIRHNL GQIYERWDGK GLPRGLSGED VLPAVRLITL AQDAIALSEA
210 220 230 240 250
VGIEEMAETI ASRADGPYEA DLARLVSANA PALMEGIGAT VDRETILALE
260 270 280 290 300
PDPPVTLDEA GCDEAFLAIA DMIDMRMPLT YGHSRMVAQL AEGAGGQMKL
310 320 330 340 350
PAADLRALRW SGCIHDIGEL VVPVATWMRN GPLSVRERDA AQLHAYYGER
360 370 380 390 400
ALASFGREGE AMAALVLRHH ERLDGSGYHR KVHASDLSPA ARILAAAEAF
410 420 430 440 450
QTSREERPHR RALSSDAAAS QLRAAVREGC ICPDAAEAVL SFAGQPSRRT
460 470 480 490 500
PPRPLAGMTP REIEVLRLIA AGLTAKEAAR KLDISPKTAD HHIQSVYAKI
510 520
GVTTRAAAAL YAVEHGLVRP GETQT
Length:525
Mass (Da):56,722
Last modified:September 21, 2011 - v1
Checksum:i4E970C0193836EDE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002279 Genomic DNA. Translation: AEH86451.1.
RefSeqiWP_013893175.1. NC_015675.1.

Genome annotation databases

EnsemblBacteriaiAEH86451; AEH86451; Mesop_1970.
KEGGimop:Mesop_1970.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiF7Y979_MESOW
AccessioniPrimary (citable) accession number: F7Y979
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: June 7, 2017
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported