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F7XMH5 (F7XMH5_METZD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length389 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEH59898.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F7XMH5 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 9523C3A2A7A10AE2

FASTA38945,135
        10         20         30         40         50         60 
MSKKTDQKIP LDINKTASYL DISEKRLEKL IERRILTANW GKYRQLLRFD KKVSHIEEGS 

        70         80         90        100        110        120 
VLNQQSNELE LVRGFPKIRR ALLLESAIIK NFETADSVAI EEKMNGYNVR AAEINGEVLA 

       130        140        150        160        170        180 
FTRGGLVCPY TTEKVRELIN LDFFRDHPDL VLCAEMVGPD NPYVPKDIYN IDSLQFFVFD 

       190        200        210        220        230        240 
IRKKNTGKPY SIDEKRKLAD EYGLAQVKFF GEYPVRDASQ KIMKIIEELG KDKREGVVVK 

       250        260        270        280        290        300 
DPEMVLQPMK YTTSQSNCAD LEHAFKFYND TGRDYLFSRI VREGFQSVEW NENDEELQKR 

       310        320        330        340        350        360 
CIQLGQSILI PMVETINKVG CGERITDDVQ IRVKSLHTAG KFKNYLQRLG VEAVFEEPVK 

       370        380 
EDDQYLVRIK KLNKSTNDKT ESIWKGDYW 

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References

[1]"The complete genome of Methanosalsum zhilinae DSM 4017."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ovchinnikova G., Daligault H., Detter J.C., Han C., Tapia R., Larimer F., Land M. expand/collapse author list , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schueler E., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 4017 / NBRC 107636 / OCM 62 / WeN5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002101 Genomic DNA. Translation: AEH59898.1.
RefSeqYP_004615117.1. NC_015676.1.

3D structure databases

ProteinModelPortalF7XMH5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH59898; AEH59898; Mzhil_0017.
GeneID10821605.
KEGGmzh:Mzhil_0017.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07468.
OMAEEKMNGY.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF7XMH5_METZD
AccessionPrimary (citable) accession number: F7XMH5
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)