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Protein
Submitted name:

DNA ligase D, 3'-phosphoesterase domain protein

Gene

Mzhil_1092

Organism
Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) (Methanohalophilus zhilinae)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMZHI679901:GHPZ-1133-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase D, 3'-phosphoesterase domain proteinImported
Gene namesi
Ordered Locus Names:Mzhil_1092Imported
OrganismiMethanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) (Methanohalophilus zhilinae)Imported
Taxonomic identifieri679901 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosalsum
ProteomesiUP000006622 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

OMAiIETEDHP.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

F7XLS2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSENLAEYKK KRDFNKTSEP SGNRTEEHKY PVFVIQKHNA RNLHYDLRLE
60 70 80 90 100
VDGVLKSWAV PKGPSMDPSK KRLAIETEDH PIEYANFEGV IPEDEYGGGT
110 120 130 140 150
VIVWDKGTYE NINEKDDKLI SMKDSIKKGH VKVILSGEKV QGKFALIKSS
160 170 180 190
GRNKGQWLLL KMKGEDISTD HNGDILDIRP ESVLSGKTIE DIEKI
Length:195
Mass (Da):22,122
Last modified:September 21, 2011 - v1
Checksum:i3655EDAEA7BDECB9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002101 Genomic DNA. Translation: AEH60948.1.
RefSeqiWP_013898385.1. NC_015676.1.
YP_004616167.1. NC_015676.1.

Genome annotation databases

EnsemblBacteriaiAEH60948; AEH60948; Mzhil_1092.
GeneIDi10822719.
KEGGimzh:Mzhil_1092.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002101 Genomic DNA. Translation: AEH60948.1.
RefSeqiWP_013898385.1. NC_015676.1.
YP_004616167.1. NC_015676.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH60948; AEH60948; Mzhil_1092.
GeneIDi10822719.
KEGGimzh:Mzhil_1092.

Phylogenomic databases

OMAiIETEDHP.

Enzyme and pathway databases

BioCyciMZHI679901:GHPZ-1133-MONOMER.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 4017 / NBRC 107636 / OCM 62 / WeN5Imported.

Entry informationi

Entry nameiF7XLS2_METZD
AccessioniPrimary (citable) accession number: F7XLS2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 29, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.