F7XHX2 (F7XHX2_SINMM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative DNA ligase EMBL AEH82872.1

Gene names

Name:	ligC EMBL AEH82872.1
Ordered Locus Names:	SM11_pD0039 EMBL AEH82872.1

Encoded on

Plasmid pSmeSM11d EMBL AEH82872.1

Organism

Sinorhizobium meliloti (strain SM11) [Complete proteome] [HAMAP] EMBL AEH82872.1

Taxonomic identifier

707241 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Rhizobium meliloti

Protein attributes

Sequence length	355 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEH82872.1
Technical term	Complete proteome Plasmid EMBL AEH82872.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F7XHX2 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 13A5A00D54494368	FASTA	355	39,210
	10 20 30 40 50 60 MASSAHGKPT KKAAPSSAAK KAGGFPLPVS TAPMEARSAT ELPGGDAWQY EPKWDGFRCL 70 80 90 100 110 120 AFKSGDEVDI RAKSGKPLGR FFPEIVALLR RLEPDMFVLD GELVIEVDGR LSFDALQMRL 130 140 150 160 170 180 HPAASRVQKL SQETPAKLIL FDMLAGTDGT ILTGEPLQTR RACLETFAKK NAVAEMLESS 190 200 210 220 230 240 PFTLDIEEAE RWLTSWEAGA TDGVVAKRRD GAYECGERAM VKVKRLKTAD CVVGGFRYES 250 260 270 280 290 300 DSSLVGSLLL GLYDTEGLLN HVGFTATISD KERPALTNQL EALREPPGFT GKAPGGPSRW 310 320 330 340 350 SSERSGEWEP VRPELVVEVR FDHVSNRRFR HGTKLMRWRP DKDPRQCTYQ QIMPS

References

[1]

"The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome." Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., Neuweger H., Stiens M., Vorholter F.J., Weidner S., Goesmann A., Puhler A., Schluter A. J. Biotechnol. 155:20-33(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SM11 EMBL AEH82872.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001832 Genomic DNA. Translation: AEH82872.1.
RefSeq	YP_005722373.1. NC_017326.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEH82872; AEH82872; SM11_pD0039.
GeneID	12313228.
KEGG	smx:SM11_pD0039.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F7XHX2_SINMM

Accession

Primary (citable) accession number: F7XHX2

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)