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F7XBW7

- F7XBW7_SINMM

UniProt

F7XBW7 - F7XBW7_SINMM

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
SM11_pC1481
Organism
Sinorhizobium meliloti (strain SM11)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSMEL707241:GLKB-5327-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:SM11_pC1481Imported
Encoded oniPlasmid pSmeSM11cImported
OrganismiSinorhizobium meliloti (strain SM11)Imported
Taxonomic identifieri707241 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000009045: Plasmid pSmeSM11c

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F7XBW7-1 [UniParc]FASTAAdd to Basket

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MSRRAKPLLQ DDSVAKSKPA RPRDPAQPNL PFDPMPERIE PCLALLKPVP    50
PKGPDWVFEV KWDGYRLAIH IEPKGVRIIT RGGHDWTHHF PAIAEATSKL 100
GVGTAILDGE AVVLDEEGRS DFGALQRSLG GRGGKRSSTE SVFFAFDLLY 150
FDGHDLSGTE LSVRRHLLEG FLDGPTGAIQ SSEEVFGDGA LLEKACSMGL 200
EGIIAKHRDR PYRSGRTGDW LKIKCLQSES FMIVGYEQSL TARGGLGSLL 250
LAGRKGHDWI YVGSVGTGFN TKDAEYLRKT LDRLKTSKPA VPLKGKNLVF 300
AQPTLIAEIE FRGP 314
Length:314
Mass (Da):34,415
Last modified:September 21, 2011 - v1
Checksum:iDDDF01C81518DC81
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001831 Genomic DNA. Translation: AEH82554.1.
RefSeqiYP_005725363.1. NC_017327.1.

Genome annotation databases

EnsemblBacteriaiAEH82554; AEH82554; SM11_pC1481.
GeneIDi12315281.
KEGGismx:SM11_pC1481.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001831 Genomic DNA. Translation: AEH82554.1 .
RefSeqi YP_005725363.1. NC_017327.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEH82554 ; AEH82554 ; SM11_pC1481 .
GeneIDi 12315281.
KEGGi smx:SM11_pC1481.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci SMEL707241:GLKB-5327-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome."
    Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., Neuweger H., Stiens M., Vorholter F.J., Weidner S., Goesmann A., Puhler A., Schluter A.
    J. Biotechnol. 155:20-33(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SM11Imported.
    Plasmid: pSmeSM11c

Entry informationi

Entry nameiF7XBW7_SINMM
AccessioniPrimary (citable) accession number: F7XBW7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported

External Data

Dasty 3

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