F7XBW7 (F7XBW7_SINMM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AEH82554.1

Gene names

Ordered Locus Names:

SM11_pC1481 EMBL AEH82554.1

Encoded on

Plasmid pSmeSM11c EMBL AEH82554.1

Organism

Sinorhizobium meliloti (strain SM11) [Complete proteome] [HAMAP] EMBL AEH82554.1

Taxonomic identifier

707241 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Rhizobium meliloti

Protein attributes

Sequence length	314 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEH82554.1
Technical term	Complete proteome Plasmid EMBL AEH82554.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F7XBW7 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: DDDF01C81518DC81	FASTA	314	34,415
	10 20 30 40 50 60 MSRRAKPLLQ DDSVAKSKPA RPRDPAQPNL PFDPMPERIE PCLALLKPVP PKGPDWVFEV 70 80 90 100 110 120 KWDGYRLAIH IEPKGVRIIT RGGHDWTHHF PAIAEATSKL GVGTAILDGE AVVLDEEGRS 130 140 150 160 170 180 DFGALQRSLG GRGGKRSSTE SVFFAFDLLY FDGHDLSGTE LSVRRHLLEG FLDGPTGAIQ 190 200 210 220 230 240 SSEEVFGDGA LLEKACSMGL EGIIAKHRDR PYRSGRTGDW LKIKCLQSES FMIVGYEQSL 250 260 270 280 290 300 TARGGLGSLL LAGRKGHDWI YVGSVGTGFN TKDAEYLRKT LDRLKTSKPA VPLKGKNLVF 310 AQPTLIAEIE FRGP

References

[1]

"The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome." Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., Neuweger H., Stiens M., Vorholter F.J., Weidner S., Goesmann A., Puhler A., Schluter A. J. Biotechnol. 155:20-33(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SM11 EMBL AEH82554.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001831 Genomic DNA. Translation: AEH82554.1.
RefSeq	YP_005725363.1. NC_017327.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEH82554; AEH82554; SM11_pC1481.
GeneID	12315281.
KEGG	smx:SM11_pC1481.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F7XBW7_SINMM

Accession

Primary (citable) accession number: F7XBW7

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)