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F7XBW7

- F7XBW7_SINMM

UniProt

F7XBW7 - F7XBW7_SINMM

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

SM11_pC1481

Organism
Sinorhizobium meliloti (strain SM11)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSMEL707241:GLKB-5327-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:SM11_pC1481Imported
    Encoded oniPlasmid pSmeSM11cImported
    OrganismiSinorhizobium meliloti (strain SM11)Imported
    Taxonomic identifieri707241 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000009045: Plasmid pSmeSM11c

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F7XBW7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSRRAKPLLQ DDSVAKSKPA RPRDPAQPNL PFDPMPERIE PCLALLKPVP    50
    PKGPDWVFEV KWDGYRLAIH IEPKGVRIIT RGGHDWTHHF PAIAEATSKL 100
    GVGTAILDGE AVVLDEEGRS DFGALQRSLG GRGGKRSSTE SVFFAFDLLY 150
    FDGHDLSGTE LSVRRHLLEG FLDGPTGAIQ SSEEVFGDGA LLEKACSMGL 200
    EGIIAKHRDR PYRSGRTGDW LKIKCLQSES FMIVGYEQSL TARGGLGSLL 250
    LAGRKGHDWI YVGSVGTGFN TKDAEYLRKT LDRLKTSKPA VPLKGKNLVF 300
    AQPTLIAEIE FRGP 314
    Length:314
    Mass (Da):34,415
    Last modified:September 21, 2011 - v1
    Checksum:iDDDF01C81518DC81
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001831 Genomic DNA. Translation: AEH82554.1.
    RefSeqiYP_005725363.1. NC_017327.1.

    Genome annotation databases

    EnsemblBacteriaiAEH82554; AEH82554; SM11_pC1481.
    GeneIDi12315281.
    KEGGismx:SM11_pC1481.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001831 Genomic DNA. Translation: AEH82554.1 .
    RefSeqi YP_005725363.1. NC_017327.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEH82554 ; AEH82554 ; SM11_pC1481 .
    GeneIDi 12315281.
    KEGGi smx:SM11_pC1481.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci SMEL707241:GLKB-5327-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome."
      Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., Neuweger H., Stiens M., Vorholter F.J., Weidner S., Goesmann A., Puhler A., Schluter A.
      J. Biotechnol. 155:20-33(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiF7XBW7_SINMM
    AccessioniPrimary (citable) accession number: F7XBW7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported, PlasmidImported

    External Data

    Dasty 3