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F7X9L1 (F7X9L1_SINMM) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length436 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. RuleBase RU000609 HAMAP-Rule MF_00455 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. RuleBase RU000609 HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1001 By similarity HAMAP-Rule MF_00455
Active site1031 By similarity HAMAP-Rule MF_00455
Metal binding2311Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2671Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2671Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2701Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2951Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3061Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3081Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3381Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
F7X9L1 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 91CEF4BD1BC686CA

FASTA43648,928
        10         20         30         40         50         60 
MSTGFFGDIA KIKYEGPEST NPLAFRHYNP DDVVLGKRME DHLRFAVAYW HTFVWPGGDP 

        70         80         90        100        110        120 
FGGQTFERPW FKDSMEAAKL KADVAFEFFQ LLGVPYYCFH DADVRPEGRN FAENTSNLNA 

       130        140        150        160        170        180 
IVDYFAGKQE ETGVKLLWGT ANLFSNRRFM AGAATNPDPD VFAFAAATVK TCIDATQRLD 

       190        200        210        220        230        240 
GENYVLWGGR EGYETLLNTD LKRELDQLGR FLNLVVEYKH RIGFKGTILI EPKPQEPTKH 

       250        260        270        280        290        300 
QYDYDVATVY GFLKRYGLEN EVKVNIEQGH AILAGHSFEH ELALANALGI FGSIDMNRND 

       310        320        330        340        350        360 
YQSGWDTDQF PNNVPEMALA YYHVLAGGGF KTGGTNFDAK LRRQSIDPED LLIGHIGGMD 

       370        380        390        400        410        420 
CCARGLKAAA KMIEDKALSA PLEARYAGWN VPEAKKMLDG GFSLEEIEAW VLKSDVNPQP 

       430 
KSGRQELLEN VVNRYV 

« Hide

References

[1]"The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome."
Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., Neuweger H., Stiens M., Vorholter F.J., Weidner S., Goesmann A., Puhler A., Schluter A.
J. Biotechnol. 155:20-33(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SM11 EMBL AEH80310.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001830 Genomic DNA. Translation: AEH80310.1.
RefSeqYP_005721571.1. NC_017325.1.

3D structure databases

ProteinModelPortalF7X9L1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH80310; AEH80310; SM11_chr3066.
GeneID12309694.
KEGGsmx:SM11_chr3066.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.

Enzyme and pathway databases

BioCycSMEL707241:GLKB-3065-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7X9L1_SINMM
AccessionPrimary (citable) accession number: F7X9L1
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: June 11, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)