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F7X9L1

- F7X9L1_SINMM

UniProt

F7X9L1 - F7X9L1_SINMM

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Protein

Xylose isomerase

Gene
xylA, SM11_chr3066
Organism
Sinorhizobium meliloti (strain SM11)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei100 – 1001 By similarityUniRule annotation
Active sitei103 – 1031 By similarityUniRule annotation
Metal bindingi231 – 2311Magnesium 1 By similarityUniRule annotation
Metal bindingi267 – 2671Magnesium 1 By similarityUniRule annotation
Metal bindingi267 – 2671Magnesium 2 By similarityUniRule annotation
Metal bindingi270 – 2701Magnesium 2 By similarityUniRule annotation
Metal bindingi295 – 2951Magnesium 1 By similarityUniRule annotation
Metal bindingi306 – 3061Magnesium 2 By similarityUniRule annotation
Metal bindingi308 – 3081Magnesium 2 By similarityUniRule annotation
Metal bindingi338 – 3381Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciSMEL707241:GLKB-3065-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotationImported
Ordered Locus Names:SM11_chr3066Imported
OrganismiSinorhizobium meliloti (strain SM11)Imported
Taxonomic identifieri707241 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000009045: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotationSAAS annotations

Structurei

3D structure databases

ProteinModelPortaliF7X9L1.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F7X9L1-1 [UniParc]FASTAAdd to Basket

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MSTGFFGDIA KIKYEGPEST NPLAFRHYNP DDVVLGKRME DHLRFAVAYW    50
HTFVWPGGDP FGGQTFERPW FKDSMEAAKL KADVAFEFFQ LLGVPYYCFH 100
DADVRPEGRN FAENTSNLNA IVDYFAGKQE ETGVKLLWGT ANLFSNRRFM 150
AGAATNPDPD VFAFAAATVK TCIDATQRLD GENYVLWGGR EGYETLLNTD 200
LKRELDQLGR FLNLVVEYKH RIGFKGTILI EPKPQEPTKH QYDYDVATVY 250
GFLKRYGLEN EVKVNIEQGH AILAGHSFEH ELALANALGI FGSIDMNRND 300
YQSGWDTDQF PNNVPEMALA YYHVLAGGGF KTGGTNFDAK LRRQSIDPED 350
LLIGHIGGMD CCARGLKAAA KMIEDKALSA PLEARYAGWN VPEAKKMLDG 400
GFSLEEIEAW VLKSDVNPQP KSGRQELLEN VVNRYV 436
Length:436
Mass (Da):48,928
Last modified:September 21, 2011 - v1
Checksum:i91CEF4BD1BC686CA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001830 Genomic DNA. Translation: AEH80310.1.
RefSeqiYP_005721571.1. NC_017325.1.

Genome annotation databases

EnsemblBacteriaiAEH80310; AEH80310; SM11_chr3066.
GeneIDi12309694.
KEGGismx:SM11_chr3066.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001830 Genomic DNA. Translation: AEH80310.1 .
RefSeqi YP_005721571.1. NC_017325.1.

3D structure databases

ProteinModelPortali F7X9L1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEH80310 ; AEH80310 ; SM11_chr3066 .
GeneIDi 12309694.
KEGGi smx:SM11_chr3066.

Phylogenomic databases

KOi K01805.

Enzyme and pathway databases

BioCyci SMEL707241:GLKB-3065-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome."
    Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., Neuweger H., Stiens M., Vorholter F.J., Weidner S., Goesmann A., Puhler A., Schluter A.
    J. Biotechnol. 155:20-33(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SM11Imported.

Entry informationi

Entry nameiF7X9L1_SINMM
AccessioniPrimary (citable) accession number: F7X9L1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: June 11, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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