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F7X514 (F7X514_SINMM) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length392 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 HAMAP-Rule MF_01201 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site541Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2731Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1511Substrate By similarity HAMAP-Rule MF_01201
Binding site3321Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue541N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
F7X514 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: D8D9511570C83B50

FASTA39241,923
        10         20         30         40         50         60 
MYCCRYRPRR VFGMQSPEFL SASSRLTVDL TALADNWRAM NERSGKARAA AVLKADAYGL 

        70         80         90        100        110        120 
GVVHAAPALY AAGARDFFVA SVEEGADLRP LVPDGRIYIL AGMWPGNEEL FFENDLVPII 

       130        140        150        160        170        180 
NSEEQLAVFM AALSERGDHP CVLHVDTGMN RLGLSPEEAL ALAHDPARPA SFSPVLVMSH 

       190        200        210        220        230        240 
LACADDPGHP MNRYQLQRFR EVTAAFEGVP ASLANSGGVF LGADYHFDLT RPGIAVYGGE 

       250        260        270        280        290        300 
AVNGAVNPMK AVVTAEARIV QVRTVPSGGT ASYGASVRFG RDSRIATVAI GYADGYHRSV 

       310        320        330        340        350        360 
SGGGVTLRQA MPSGAFGFLH GMKVPHVGRV TMDLSLFDVT DLPEAAVRAG DYIEVFGRNV 

       370        380        390 
VIDDVARAGG TIGYELLTSL GRRYHRTYVG GA

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References

[1]"The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome."
Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., Neuweger H., Stiens M., Vorholter F.J., Weidner S., Goesmann A., Puhler A., Schluter A.
J. Biotechnol. 155:20-33(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SM11 EMBL AEH79790.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001830 Genomic DNA. Translation: AEH79790.1.
RefSeqYP_005721051.1. NC_017325.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH79790; AEH79790; SM11_chr2537.
GeneID12310982.
KEGGsmx:SM11_chr2537.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycSMEL707241:GLKB-2536-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7X514_SINMM
AccessionPrimary (citable) accession number: F7X514
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 29, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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