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F7WN39 (F7WN39_MYCTC) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Glutamate decarboxylase gadB EMBL AEJ48367.1
Gene names
Name:gadB EMBL AGM02082.1
Ordered Locus Names:CCDC5079_3178 EMBL AEJ48367.1
ORF Names:CFBS_3649 EMBL AGM02082.1
OrganismMycobacterium tuberculosis (strain CCDC5079) [Complete proteome] [HAMAP] EMBL AEJ48367.1
Taxonomic identifier443149 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex

Protein attributes

Sequence length460 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F7WN39 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: B5DA3156D4C7CB4F

FASTA46050,780
        10         20         30         40         50         60 
MSRSHPSVPA HSIAPAYTGR MFTAPVPALR MPDESMDPEA AYRFIHDELM LDGSSRLNLA 

        70         80         90        100        110        120 
TFVTTWMDPE AEKLMAETFD KNMIDKDEYP ATAAIEARCV SMVADLFHAE GLRDHDPTSA 

       130        140        150        160        170        180 
TGVSTIGSSE AVMLGGLALK WRWRQRVGSW KGRMPNLVMG SNVQVVWEKF CRYFDVEPRY 

       190        200        210        220        230        240 
LPMERGRYVI TPEQVLAAVD ENTIGVVAIL GTTYTGELEP IAEICAALDK LAAGGGVDVP 

       250        260        270        280        290        300 
VHVDAASGGF VVPFLHPDLV WDFRLPRVVS INVSGHKYGL TYPGVGFVVW RGPEHLPEDL 

       310        320        330        340        350        360 
VFRVNYLGGD MPTFTLNFSR PGNQVVGQYY NFLRLGRDGY TKVMQALSHT ARWLGDQLRE 

       370        380        390        400        410        420 
VDHCEVISDG SAIPVVSFRL AGDRGYTEFD VSHELRTFGW QVPAYTMPDN ATDVAVLRIV 

       430        440        450        460 
VREGLSADLA RALHDDAVTA LAALDKVKPG GHFDAQHFAH 

« Hide

References

[1]"Complete Genome Sequences of Mycobacterium tuberculosis Strains CCDC5079 and CCDC5080, Which Belong to the Beijing Family."
Zhang Y., Chen C., Liu J., Deng H., Pan A., Zhang L., Zhao X., Huang M., Lu B., Dong H., Du P., Chen W., Wan K.
J. Bacteriol. 193:5591-5592(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCDC5079 EMBL AEJ48367.1.
[2]"ContigScape: a Cytoscape plugin facilitating microbial genome gap closing."
Tang B., Wang Q., Yang M., Xie F., Zhu Y., Zhuo Y., Wang S., Gao H., Ding X., Zhang L., Zhao G., Zheng H.
BMC Genomics 14:289-289(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCDC5079 EMBL AGM02082.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001641 Genomic DNA. Translation: AEJ48367.1.
CP002884 Genomic DNA. Translation: AGM02082.1.
RefSeqYP_005914600.1. NC_017523.1.
YP_008008485.1. NC_021251.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEJ48367; AEJ48367; CCDC5079_3178.
AGM02082; AGM02082; CFBS_3649.
GeneID12504694.
15617863.
KEGGmte:CCDC5079_3178.
mtur:CFBS_3649.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.
OMAPTFQINF.

Enzyme and pathway databases

BioCycMTUB443149:GLGT-3219-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF7WN39_MYCTC
AccessionPrimary (citable) accession number: F7WN39
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 9, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)