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F7WF80 (F7WF80_MYCTC) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

ATP-dependent DNA ligase EMBL AEJ46057.1
Gene names
Ordered Locus Names:CCDC5079_0867 EMBL AEJ46057.1
ORF Names:CFBS_0986 EMBL AGL99418.1
OrganismMycobacterium tuberculosis (strain CCDC5079) [Complete proteome] [HAMAP] EMBL AEJ46057.1
Taxonomic identifier443149 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex

Protein attributes

Sequence length759 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F7WF80 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 8E1B59E06A356B3D

FASTA75983,625
        10         20         30         40         50         60 
MGSASEQRVT LTNADKVLYP ATGTTKSDIF DYYAGVAEVM LGHIAGRPAT RKRWPNGVDQ 

        70         80         90        100        110        120 
PAFFEKQLAL SAPPWLSRAT VAHRSGTTTY PIIDSATGLA WIAQQAALEV HVPQWRFVAE 

       130        140        150        160        170        180 
PGSGELNPGP ATRLVFDLDP GEGVMMAQLA EVARAVRDLL ADIGLVTFPV TSGSKGLHLY 

       190        200        210        220        230        240 
TPLDEPVSSR GATVLAKRVA QRLEQAMPAL VTSTMTKSLR AGKVFVDWSQ NSGSKTTIAP 

       250        260        270        280        290        300 
YSLRGRTHPT VAAPRTWAEL DDPALRQLSY DEVLTRIARD GDLLERLDAD APVADRLTRY 

       310        320        330        340        350        360 
RRMRDASKTP EPIPTAKPVT GDGNTFVIQE HHARRPHYDF RLERDGVLVS WAVPKNLPDN 

       370        380        390        400        410        420 
TSVNHLAIHT EDHPLEYATF EGAIPSGEYG AGKVIIWDSG TYDTEKFHDD PHTGEVIVNL 

       430        440        450        460        470        480 
HGGRISGRYA LIRTNGDRWL AHRLKNQKDQ KVFEFDNLAP MLATHGTVAG LKASQWAFEG 

       490        500        510        520        530        540 
KWDGYRLLVE ADHGAVRLRS RSGRDVTAEY PQLRALAEDL ADHHVVLDGE AVVLDSSGVP 

       550        560        570        580        590        600 
SFSQMQNRGR DTRVEFWAFD LLYLDGRALL GTRYQDRRKL LETLANATSL TVPELLPGDG 

       610        620        630        640        650        660 
AQAFACSRKH GWEGVIAKRR DSRYQPGRRC ASWVKDKHWN TQEVVIGGWR AGEGGRSSGV 

       670        680        690        700        710        720 
GSLLMGIPGP GGLQFAGRVG TGLSERELAN LKEMLAPLHT DESPFDVPLP ARDAKGITYV 

       730        740        750 
KPALVAEVRY SEWTPEGRLR QSSWRGLRPD KKPSEVVRE 

« Hide

References

[1]"Complete Genome Sequences of Mycobacterium tuberculosis Strains CCDC5079 and CCDC5080, Which Belong to the Beijing Family."
Zhang Y., Chen C., Liu J., Deng H., Pan A., Zhang L., Zhao X., Huang M., Lu B., Dong H., Du P., Chen W., Wan K.
J. Bacteriol. 193:5591-5592(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCDC5079 EMBL AEJ46057.1.
[2]"ContigScape: a Cytoscape plugin facilitating microbial genome gap closing."
Tang B., Wang Q., Yang M., Xie F., Zhu Y., Zhuo Y., Wang S., Gao H., Ding X., Zhang L., Zhao G., Zheng H.
BMC Genomics 14:289-289(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCDC5079 EMBL AGL99418.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001641 Genomic DNA. Translation: AEJ46057.1.
CP002884 Genomic DNA. Translation: AGL99418.1.
RefSeqYP_005912290.1. NC_017523.1.
YP_008005822.1. NC_021251.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEJ46057; AEJ46057; CCDC5079_0867.
AGL99418; AGL99418; CFBS_0986.
GeneID12502353.
15615200.
KEGGmte:CCDC5079_0867.
mtur:CFBS_0986.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMASKGIHLY.

Enzyme and pathway databases

BioCycMTUB443149:GLGT-881-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7WF80_MYCTC
AccessionPrimary (citable) accession number: F7WF80
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 9, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)