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Protein
Submitted name:

WGS project CABT00000000 data, contig 2.59

Gene

SMAC_08544

Organism
Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
WGS project CABT00000000 data, contig 2.59Imported
Gene namesi
ORF Names:SMAC_08544Imported
OrganismiSordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)Imported
Taxonomic identifieri771870 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesSordariaceaeSordaria
ProteomesiUP000001881 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliF7WA98.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiF7WA98.
KOiK01176.
OrthoDBiEOG7RBZJ4.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F7WA98-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAFLGLIPP IPKSNPRTTT SLRRHLLPTP SPPTPPSCLF SSFNIHPLPP
60 70 80 90 100
RRTMSAQPHP PPRFRMQLGI TQIWIPPACK ASWKTGNGYD IYDLFDLGEF
110 120 130 140 150
EQKGSRKTKW GSKSELQQLV AIGAQYGVSV LFDAVLNHKA AADFKEPVLA
160 170 180 190 200
RRVDPKDRRV VLDEEPSEIE AWTGYDFPGR QGLYSPLRWS ARHFKGIDYD
210 220 230 240 250
DCRKENAIWK FEGKEWSEDV DEENGNYDYL MFADIDHAHP EVKRDIFHWT
260 270 280 290 300
WWLKTQLPQL GGLRLDAIKH YSYAFVRELL AHIDRHVSPG LPGSPDQWYI
310 320 330 340 350
VGEYWREDSE FLARYIEYMH HRLSLFDVQL VSNFSRISQA SEHLQSSATA
360 370 380 390 400
PGITYGSPDT DLRLLFDDTL CIWKPHNTVS FVVNHDTQSG QSLETPIAPF
410 420 430 440 450
FMPLAYSLIM LRANAGVPCV FWSDLYGSFG VTSTSTPDSE DDCSLNDTPL
460 470 480 490 500
PDPQHWKPPM CGGQVLPKLM LARRLWAYGT QHDYFDHPHC VGFTRTGHYS
510 520 530 540 550
QSGGAGVACV MANWWEHASK RMYVGVEHAG EVWTDLLKFC PGEVVIDEEG
560 570 580 590 600
WGVFPVAARS VAVWVSKEAE GREGVDAFEL DTDVYGFNKR QQEQAYESQR
610 620
GPAAEEEPED WMVAARGAAA EYLAMTGSD
Length:629
Mass (Da):71,238
Last modified:September 20, 2011 - v1
Checksum:i78CADC76EB453EE9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABT02000059 Genomic DNA. Translation: CCC05292.1.
RefSeqiXP_003346042.1. XM_003345994.1.

Genome annotation databases

GeneIDi10803416.
KEGGismp:SMAC_08544.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABT02000059 Genomic DNA. Translation: CCC05292.1.
RefSeqiXP_003346042.1. XM_003345994.1.

3D structure databases

ProteinModelPortaliF7WA98.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10803416.
KEGGismp:SMAC_08544.

Phylogenomic databases

InParanoidiF7WA98.
KOiK01176.
OrthoDBiEOG7RBZJ4.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis."
    Nowrousian M., Stajich J.E., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.-C., Osiewacz H.D., Poeggeler S., Read N.D., Seiler S., Smith K.M., Zickler D., Kueck U., Freitag M.
    PLoS Genet. 6:E1000891-E1000891(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hellImported.
    Tissue: MyceliumImported.

Entry informationi

Entry nameiF7WA98_SORMK
AccessioniPrimary (citable) accession number: F7WA98
Entry historyi
Integrated into UniProtKB/TrEMBL: September 20, 2011
Last sequence update: September 20, 2011
Last modified: January 6, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.