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F7W7J8 (F7W7J8_SORMK) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length330 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

(S)-malate + NAD+ = oxaloacetate + NADH. RuleBase RU003405

Sequence similarities

Belongs to the LDH/MDH superfamily. MDH type 1 family. RuleBase RU004065

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CCC13482.1

Sequences

Sequence LengthMass (Da)Tools
F7W7J8 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 2BA774C53398EF20

FASTA33034,360
        10         20         30         40         50         60 
MVKAVVAGAA GGIGQPLSLL LKLSPLVDEL SLYDVVNTPG VAADLSHISS TAKTTGYLPP 

        70         80         90        100        110        120 
NDGAKAAFKD ADIIVIPAGI PRKPGMTRDD LFNINAGIVK GLIEVAAEVA PNAFILVISN 

       130        140        150        160        170        180 
PVNSTVPISA EVLKAKGVFN AQRLFGVTTL DIVRAETFVA EIAGKSNPQE LVVPVIGGHS 

       190        200        210        220        230        240 
GETIVPLFSK VTPSVTIPDD KYDALVNRVQ FGGDEVVKAK EGLGSATLSM AYAGYRFAEK 

       250        260        270        280        290        300 
LLKASKGAKG LVEPSYVYLP GIPGGKEIAE KTGVDFFSVP IELGPNGAEK AIDILGDITE 

       310        320        330 
KEKTLLEAAV KGLKGNIQKG VDFAHNPPQK

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References

[1]"De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis."
Nowrousian M., Stajich J., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.C., Osiewacz H.D., Poeggeler S., Read N., Seiler S., Smith K., Zickler D., Kueck U., Freitag M.
PLoS Genet. 6:e1000891-e1000891(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hell.
Tissue: Mycelium EMBL CCC13482.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CABT02000039 Genomic DNA. Translation: CCC13482.1.
RefSeqXP_003345822.1. XM_003345774.1.

3D structure databases

ProteinModelPortalF7W7J8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID10803190.
KEGGsmp:SMAC_07106.

Phylogenomic databases

KOK00026.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
3.90.110.10. 1 hit.
InterProIPR001557. L-lactate/malate_DH.
IPR022383. Lactate/malate_DH_C.
IPR001236. Lactate/malate_DH_N.
IPR015955. Lactate_DH/Glyco_Ohase_4_C.
IPR001252. Malate_DH_AS.
IPR010097. Malate_DH_type1.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR11540. PTHR11540. 1 hit.
PTHR11540:SF1. PTHR11540:SF1. 1 hit.
PfamPF02866. Ldh_1_C. 1 hit.
PF00056. Ldh_1_N. 1 hit.
[Graphical view]
PIRSFPIRSF000102. Lac_mal_DH. 1 hit.
SUPFAMSSF56327. Lactate_DH/Glyco_hydro_4_C. 1 hit.
TIGRFAMsTIGR01772. MDH_euk_gproteo. 1 hit.
PROSITEPS00068. MDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7W7J8_SORMK
AccessionPrimary (citable) accession number: F7W7J8
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: March 6, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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