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F7W6U5

- F7W6U5_SORMK

UniProt

F7W6U5 - F7W6U5_SORMK

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Protein
Submitted name: WGS project CABT00000000 data, contig 2.36
Gene
SMAC_07013
Organism
Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. serine-tRNA ligase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. seryl-tRNA aminoacylation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
WGS project CABT00000000 data, contig 2.36Imported
Gene namesi
ORF Names:SMAC_07013Imported
OrganismiSordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)Imported
Taxonomic identifieri771870 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesSordariaceaeSordaria
ProteomesiUP000001881: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: InterPro
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01875.
OrthoDBiEOG7PVWZM.

Family and domain databases

Gene3Di1.10.287.40. 1 hit.
InterProiIPR002314. aa-tRNA-synt_IIb_cons-dom.
IPR006195. aa-tRNA-synth_II.
IPR002317. Ser-tRNA-ligase_type_1.
IPR015866. Ser-tRNA-synth_1_N.
IPR010978. tRNA-bd_arm.
[Graphical view]
PANTHERiPTHR11778. PTHR11778. 1 hit.
PfamiPF02403. Seryl_tRNA_N. 1 hit.
PF00587. tRNA-synt_2b. 1 hit.
[Graphical view]
PIRSFiPIRSF001529. Ser-tRNA-synth_IIa. 1 hit.
PRINTSiPR00981. TRNASYNTHSER.
SUPFAMiSSF46589. SSF46589. 1 hit.
TIGRFAMsiTIGR00414. serS. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F7W6U5-1 [UniParc]FASTAAdd to Basket

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MLDVNDFSMA PSAHMSLHIL LRQFACVHQA HSLAERGGNP EKIRESQRKR    50
FAPVEAVDEV IALWEDHRKT AYSATQLNAK INEVQKQIGP KKKAYTTHIR 100
DNCSTTGCSN TTALVKVKTI GNLVHDSVPV SNNEDNNTVE RSWAPEGVSF 150
EKKDVLSHHE VLRKLDGYDP ERGVKVVGHR GYFLKKWGVF LNQAIINYGL 200
EFLSEREYTP LQTPQLMLRE QMAKTAQLSQ FDEELYKVTG DQADKYLIAT 250
SEQPISAFHS DEWLQAKDLP LKYAGYSTCF RKEAGAHGKD VWGIFRVHEF 300
TKVEQFCVTE PEKSWEMFDH MISNSEAFYQ SLGIPYRVVA IVSGALNNAA 350
AKKLDLEAWF PHQGEFKELV SCSNCTDYQS RDLEIRFGVK KQTDIKKTYV 400
HCLNSTLTAT TRTICAILEN FQTPEGVKVP EPLRKYLPGA PEFIPFAPEP 450
VKEVKEGKGG KKGEAAPKKE EALPIRQ 477
Length:477
Mass (Da):53,936
Last modified:September 21, 2011 - v1
Checksum:i422D2F4FB7899E33
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CABT02000036 Genomic DNA. Translation: CCC13235.1.
RefSeqiXP_003349661.1. XM_003349613.1.

Genome annotation databases

GeneIDi10807195.
KEGGismp:SMAC_07013.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CABT02000036 Genomic DNA. Translation: CCC13235.1 .
RefSeqi XP_003349661.1. XM_003349613.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 10807195.
KEGGi smp:SMAC_07013.

Phylogenomic databases

KOi K01875.
OrthoDBi EOG7PVWZM.

Family and domain databases

Gene3Di 1.10.287.40. 1 hit.
InterProi IPR002314. aa-tRNA-synt_IIb_cons-dom.
IPR006195. aa-tRNA-synth_II.
IPR002317. Ser-tRNA-ligase_type_1.
IPR015866. Ser-tRNA-synth_1_N.
IPR010978. tRNA-bd_arm.
[Graphical view ]
PANTHERi PTHR11778. PTHR11778. 1 hit.
Pfami PF02403. Seryl_tRNA_N. 1 hit.
PF00587. tRNA-synt_2b. 1 hit.
[Graphical view ]
PIRSFi PIRSF001529. Ser-tRNA-synth_IIa. 1 hit.
PRINTSi PR00981. TRNASYNTHSER.
SUPFAMi SSF46589. SSF46589. 1 hit.
TIGRFAMsi TIGR00414. serS. 1 hit.
PROSITEi PS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis."
    Nowrousian M., Stajich J., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.C., Osiewacz H.D., Poeggeler S., Read N., Seiler S., Smith K., Zickler D., Kueck U., Freitag M.
    PLoS Genet. 6:E1000891-E1000891(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hell.
    Tissue: MyceliumImported.

Entry informationi

Entry nameiF7W6U5_SORMK
AccessioniPrimary (citable) accession number: F7W6U5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 14, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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