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F7W6U5

- F7W6U5_SORMK

UniProt

F7W6U5 - F7W6U5_SORMK

Protein
Submitted name:

WGS project CABT00000000 data, contig 2.36

Gene

SMAC_07013

Organism
Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. serine-tRNA ligase activity Source: InterPro

    GO - Biological processi

    1. seryl-tRNA aminoacylation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    WGS project CABT00000000 data, contig 2.36Imported
    Gene namesi
    ORF Names:SMAC_07013Imported
    OrganismiSordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)Imported
    Taxonomic identifieri771870 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesSordariaceaeSordaria
    ProteomesiUP000001881: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: InterPro

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    KOiK01875.
    OrthoDBiEOG7PVWZM.

    Family and domain databases

    Gene3Di1.10.287.40. 1 hit.
    InterProiIPR002314. aa-tRNA-synt_IIb_cons-dom.
    IPR006195. aa-tRNA-synth_II.
    IPR002317. Ser-tRNA-ligase_type_1.
    IPR015866. Ser-tRNA-synth_1_N.
    IPR010978. tRNA-bd_arm.
    [Graphical view]
    PANTHERiPTHR11778. PTHR11778. 1 hit.
    PfamiPF02403. Seryl_tRNA_N. 1 hit.
    PF00587. tRNA-synt_2b. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001529. Ser-tRNA-synth_IIa. 1 hit.
    PRINTSiPR00981. TRNASYNTHSER.
    SUPFAMiSSF46589. SSF46589. 1 hit.
    TIGRFAMsiTIGR00414. serS. 1 hit.
    PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F7W6U5-1 [UniParc]FASTAAdd to Basket

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    MLDVNDFSMA PSAHMSLHIL LRQFACVHQA HSLAERGGNP EKIRESQRKR    50
    FAPVEAVDEV IALWEDHRKT AYSATQLNAK INEVQKQIGP KKKAYTTHIR 100
    DNCSTTGCSN TTALVKVKTI GNLVHDSVPV SNNEDNNTVE RSWAPEGVSF 150
    EKKDVLSHHE VLRKLDGYDP ERGVKVVGHR GYFLKKWGVF LNQAIINYGL 200
    EFLSEREYTP LQTPQLMLRE QMAKTAQLSQ FDEELYKVTG DQADKYLIAT 250
    SEQPISAFHS DEWLQAKDLP LKYAGYSTCF RKEAGAHGKD VWGIFRVHEF 300
    TKVEQFCVTE PEKSWEMFDH MISNSEAFYQ SLGIPYRVVA IVSGALNNAA 350
    AKKLDLEAWF PHQGEFKELV SCSNCTDYQS RDLEIRFGVK KQTDIKKTYV 400
    HCLNSTLTAT TRTICAILEN FQTPEGVKVP EPLRKYLPGA PEFIPFAPEP 450
    VKEVKEGKGG KKGEAAPKKE EALPIRQ 477
    Length:477
    Mass (Da):53,936
    Last modified:September 21, 2011 - v1
    Checksum:i422D2F4FB7899E33
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CABT02000036 Genomic DNA. Translation: CCC13235.1.
    RefSeqiXP_003349661.1. XM_003349613.1.

    Genome annotation databases

    GeneIDi10807195.
    KEGGismp:SMAC_07013.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CABT02000036 Genomic DNA. Translation: CCC13235.1 .
    RefSeqi XP_003349661.1. XM_003349613.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 10807195.
    KEGGi smp:SMAC_07013.

    Phylogenomic databases

    KOi K01875.
    OrthoDBi EOG7PVWZM.

    Family and domain databases

    Gene3Di 1.10.287.40. 1 hit.
    InterProi IPR002314. aa-tRNA-synt_IIb_cons-dom.
    IPR006195. aa-tRNA-synth_II.
    IPR002317. Ser-tRNA-ligase_type_1.
    IPR015866. Ser-tRNA-synth_1_N.
    IPR010978. tRNA-bd_arm.
    [Graphical view ]
    PANTHERi PTHR11778. PTHR11778. 1 hit.
    Pfami PF02403. Seryl_tRNA_N. 1 hit.
    PF00587. tRNA-synt_2b. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001529. Ser-tRNA-synth_IIa. 1 hit.
    PRINTSi PR00981. TRNASYNTHSER.
    SUPFAMi SSF46589. SSF46589. 1 hit.
    TIGRFAMsi TIGR00414. serS. 1 hit.
    PROSITEi PS50862. AA_TRNA_LIGASE_II. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis."
      Nowrousian M., Stajich J.E., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.-C., Osiewacz H.D., Poeggeler S., Read N.D., Seiler S., Smith K.M., Zickler D., Kueck U., Freitag M.
      PLoS Genet. 6:E1000891-E1000891(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hellImported.
      Tissue: MyceliumImported.

    Entry informationi

    Entry nameiF7W6U5_SORMK
    AccessioniPrimary (citable) accession number: F7W6U5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3