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F7W6Q0

- F7W6Q0_SORMK

UniProt

F7W6Q0 - F7W6Q0_SORMK

Protein
Submitted name:

WGS project CABT00000000 data, contig 2.35

Gene

SMAC_06408

Organism
Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    WGS project CABT00000000 data, contig 2.35Imported
    Gene namesi
    ORF Names:SMAC_06408Imported
    OrganismiSordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)Imported
    Taxonomic identifieri771870 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesSordariaceaeSordaria
    ProteomesiUP000001881: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.
    OrthoDBiEOG7380F0.

    Family and domain databases

    Gene3Di3.40.640.10. 2 hits.
    3.90.1150.10. 1 hit.
    InterProiIPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 2 hits.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    F7W6Q0-1 [UniParc]FASTAAdd to Basket

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    MNGTHSTDKS ALNRAGEVDR LIDAVKSLIV PFIRDADNAA SFRATGQLPP    50
    DNRNVLVESL RPEQLVKQLA LSLPQGEGAG QDGLLQTIQS ILSHSVNTWD 100
    QGFMDKLYAS TNAVGVVTEL LLSVLNTNLH VYQVSPALTV IEKHTAKQFA 150
    SLFGFTGPRA GGVTCQGGSA SNLTSIVVAR NTLFPLSKLH GNNHTECGAP 200
    GPLILLTSAH GHYSVEKAAV TCGFGSSSVW TVPVDAQGRM CPSALRETVL 250
    RAKQEGKHPF YVNATAGTTV MGSYDPLDEI ADLCDEFGMW MHIDGSWGGP 300
    AIFSEKHRHK MQGSHRARSL TVNPHKMLNV PVTCSFLLTD DVKVFHKANT 350
    LPAGYLFHGP AAAAGDDEGI DEEKKTTAEE EVLINGNGCG NGNGPKEVWD 400
    LADLTLQCGR RGDALKLALS WIYYGAAGFE RQIDGAFEMA AYLADLISQR 450
    KDFVLVSSNP PPCLQVCFYY APGGKLAEDP EENTRRTSKM VEKLIARGFM 500
    VDYAPGERGS FFRVVVNCQT LRGTVEGLVK GLEAVGREVV VVPPAI 546
    Length:546
    Mass (Da):58,765
    Last modified:September 21, 2011 - v1
    Checksum:i26DB0B7852983802
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CABT02000035 Genomic DNA. Translation: CCC13189.1.
    RefSeqiXP_003344753.1. XM_003344705.1.

    Genome annotation databases

    GeneIDi10802102.
    KEGGismp:SMAC_06408.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CABT02000035 Genomic DNA. Translation: CCC13189.1 .
    RefSeqi XP_003344753.1. XM_003344705.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 10802102.
    KEGGi smp:SMAC_06408.

    Phylogenomic databases

    KOi K01580.
    OrthoDBi EOG7380F0.

    Family and domain databases

    Gene3Di 3.40.640.10. 2 hits.
    3.90.1150.10. 1 hit.
    InterProi IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 2 hits.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis."
      Nowrousian M., Stajich J.E., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.-C., Osiewacz H.D., Poeggeler S., Read N.D., Seiler S., Smith K.M., Zickler D., Kueck U., Freitag M.
      PLoS Genet. 6:E1000891-E1000891(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hellImported.
      Tissue: MyceliumImported.

    Entry informationi

    Entry nameiF7W6Q0_SORMK
    AccessioniPrimary (citable) accession number: F7W6Q0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3