F7W6Q0 (F7W6Q0_SORMK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
WGS project CABT00000000 data, contig 2.35 EMBL CCC13189.1

Gene names

ORF Names:

SMAC_06408 EMBL CCC13189.1

Organism

Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) [Complete proteome] EMBL CCC13189.1

Taxonomic identifier

771870 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Pezizomycotina › leotiomyceta › sordariomyceta › Sordariomycetes › Sordariomycetidae › Sordariales › Sordariaceae › Sordaria › Sordaria macrospora

Protein attributes

Sequence length	546 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CCC13189.1

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F7W6Q0 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 26DB0B7852983802	FASTA	546	58,765
	10 20 30 40 50 60 MNGTHSTDKS ALNRAGEVDR LIDAVKSLIV PFIRDADNAA SFRATGQLPP DNRNVLVESL 70 80 90 100 110 120 RPEQLVKQLA LSLPQGEGAG QDGLLQTIQS ILSHSVNTWD QGFMDKLYAS TNAVGVVTEL 130 140 150 160 170 180 LLSVLNTNLH VYQVSPALTV IEKHTAKQFA SLFGFTGPRA GGVTCQGGSA SNLTSIVVAR 190 200 210 220 230 240 NTLFPLSKLH GNNHTECGAP GPLILLTSAH GHYSVEKAAV TCGFGSSSVW TVPVDAQGRM 250 260 270 280 290 300 CPSALRETVL RAKQEGKHPF YVNATAGTTV MGSYDPLDEI ADLCDEFGMW MHIDGSWGGP 310 320 330 340 350 360 AIFSEKHRHK MQGSHRARSL TVNPHKMLNV PVTCSFLLTD DVKVFHKANT LPAGYLFHGP 370 380 390 400 410 420 AAAAGDDEGI DEEKKTTAEE EVLINGNGCG NGNGPKEVWD LADLTLQCGR RGDALKLALS 430 440 450 460 470 480 WIYYGAAGFE RQIDGAFEMA AYLADLISQR KDFVLVSSNP PPCLQVCFYY APGGKLAEDP 490 500 510 520 530 540 EENTRRTSKM VEKLIARGFM VDYAPGERGS FFRVVVNCQT LRGTVEGLVK GLEAVGREVV VVPPAI

References

[1]

"De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis." Nowrousian M., Stajich J., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.C., Osiewacz H.D., Poeggeler S., Read N., Seiler S., Smith K., Zickler D., Kueck U., Freitag M. PLoS Genet. 6:e1000891-e1000891(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hell. Tissue: Mycelium EMBL CCC13189.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CABT02000035 Genomic DNA. Translation: CCC13189.1.
RefSeq	XP_003344753.1. XM_003344705.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10802102.
KEGG	smp:SMAC_06408.
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 2 hits. 3.90.1150.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 2 hits. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F7W6Q0_SORMK

Accession

Primary (citable) accession number: F7W6Q0

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	March 6, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)