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F7W6Q0 (F7W6Q0_SORMK) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:SMAC_06408 EMBL CCC13189.1
OrganismSordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) [Complete proteome] EMBL CCC13189.1
Taxonomic identifier771870 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesSordariaceaeSordaria

Protein attributes

Sequence length546 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CCC13189.1

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F7W6Q0 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 26DB0B7852983802

FASTA54658,765
        10         20         30         40         50         60 
MNGTHSTDKS ALNRAGEVDR LIDAVKSLIV PFIRDADNAA SFRATGQLPP DNRNVLVESL 

        70         80         90        100        110        120 
RPEQLVKQLA LSLPQGEGAG QDGLLQTIQS ILSHSVNTWD QGFMDKLYAS TNAVGVVTEL 

       130        140        150        160        170        180 
LLSVLNTNLH VYQVSPALTV IEKHTAKQFA SLFGFTGPRA GGVTCQGGSA SNLTSIVVAR 

       190        200        210        220        230        240 
NTLFPLSKLH GNNHTECGAP GPLILLTSAH GHYSVEKAAV TCGFGSSSVW TVPVDAQGRM 

       250        260        270        280        290        300 
CPSALRETVL RAKQEGKHPF YVNATAGTTV MGSYDPLDEI ADLCDEFGMW MHIDGSWGGP 

       310        320        330        340        350        360 
AIFSEKHRHK MQGSHRARSL TVNPHKMLNV PVTCSFLLTD DVKVFHKANT LPAGYLFHGP 

       370        380        390        400        410        420 
AAAAGDDEGI DEEKKTTAEE EVLINGNGCG NGNGPKEVWD LADLTLQCGR RGDALKLALS 

       430        440        450        460        470        480 
WIYYGAAGFE RQIDGAFEMA AYLADLISQR KDFVLVSSNP PPCLQVCFYY APGGKLAEDP 

       490        500        510        520        530        540 
EENTRRTSKM VEKLIARGFM VDYAPGERGS FFRVVVNCQT LRGTVEGLVK GLEAVGREVV 


VVPPAI 

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References

[1]"De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis."
Nowrousian M., Stajich J., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.C., Osiewacz H.D., Poeggeler S., Read N., Seiler S., Smith K., Zickler D., Kueck U., Freitag M.
PLoS Genet. 6:E1000891-E1000891(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hell.
Tissue: Mycelium EMBL CCC13189.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CABT02000035 Genomic DNA. Translation: CCC13189.1.
RefSeqXP_003344753.1. XM_003344705.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID10802102.
KEGGsmp:SMAC_06408.

Phylogenomic databases

KOK01580.
OrthoDBEOG7380F0.

Family and domain databases

Gene3D3.40.640.10. 2 hits.
3.90.1150.10. 1 hit.
InterProIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 2 hits.
[Graphical view]
SUPFAMSSF53383. SSF53383. 2 hits.
ProtoNetSearch...

Entry information

Entry nameF7W6Q0_SORMK
AccessionPrimary (citable) accession number: F7W6Q0
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 14, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)