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F7W6Q0

- F7W6Q0_SORMK

UniProt

F7W6Q0 - F7W6Q0_SORMK

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Protein
Submitted name:

WGS project CABT00000000 data, contig 2.35

Gene
SMAC_06408
Organism
Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
WGS project CABT00000000 data, contig 2.35Imported
Gene namesi
ORF Names:SMAC_06408Imported
OrganismiSordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)Imported
Taxonomic identifieri771870 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesSordariaceaeSordaria
ProteomesiUP000001881: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OrthoDBiEOG7380F0.

Family and domain databases

Gene3Di3.40.640.10. 2 hits.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 2 hits.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.

Sequencei

Sequence statusi: Complete.

F7W6Q0-1 [UniParc]FASTAAdd to Basket

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MNGTHSTDKS ALNRAGEVDR LIDAVKSLIV PFIRDADNAA SFRATGQLPP    50
DNRNVLVESL RPEQLVKQLA LSLPQGEGAG QDGLLQTIQS ILSHSVNTWD 100
QGFMDKLYAS TNAVGVVTEL LLSVLNTNLH VYQVSPALTV IEKHTAKQFA 150
SLFGFTGPRA GGVTCQGGSA SNLTSIVVAR NTLFPLSKLH GNNHTECGAP 200
GPLILLTSAH GHYSVEKAAV TCGFGSSSVW TVPVDAQGRM CPSALRETVL 250
RAKQEGKHPF YVNATAGTTV MGSYDPLDEI ADLCDEFGMW MHIDGSWGGP 300
AIFSEKHRHK MQGSHRARSL TVNPHKMLNV PVTCSFLLTD DVKVFHKANT 350
LPAGYLFHGP AAAAGDDEGI DEEKKTTAEE EVLINGNGCG NGNGPKEVWD 400
LADLTLQCGR RGDALKLALS WIYYGAAGFE RQIDGAFEMA AYLADLISQR 450
KDFVLVSSNP PPCLQVCFYY APGGKLAEDP EENTRRTSKM VEKLIARGFM 500
VDYAPGERGS FFRVVVNCQT LRGTVEGLVK GLEAVGREVV VVPPAI 546
Length:546
Mass (Da):58,765
Last modified:September 21, 2011 - v1
Checksum:i26DB0B7852983802
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CABT02000035 Genomic DNA. Translation: CCC13189.1.
RefSeqiXP_003344753.1. XM_003344705.1.

Genome annotation databases

GeneIDi10802102.
KEGGismp:SMAC_06408.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CABT02000035 Genomic DNA. Translation: CCC13189.1 .
RefSeqi XP_003344753.1. XM_003344705.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 10802102.
KEGGi smp:SMAC_06408.

Phylogenomic databases

KOi K01580.
OrthoDBi EOG7380F0.

Family and domain databases

Gene3Di 3.40.640.10. 2 hits.
3.90.1150.10. 1 hit.
InterProi IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 2 hits.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis."
    Nowrousian M., Stajich J., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.C., Osiewacz H.D., Poeggeler S., Read N., Seiler S., Smith K., Zickler D., Kueck U., Freitag M.
    PLoS Genet. 6:E1000891-E1000891(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hell.
    Tissue: MyceliumImported.

Entry informationi

Entry nameiF7W6Q0_SORMK
AccessioniPrimary (citable) accession number: F7W6Q0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 14, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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