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F7W3T6 (F7W3T6_SORMK) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
WGS project CABT00000000 data, contig 2.25 EMBL CCC12245.1
Gene names
ORF Names:SMAC_05318 EMBL CCC12245.1
OrganismSordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) [Complete proteome] EMBL CCC12245.1
Taxonomic identifier771870 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Pezizomycotina › Sordariomycetes › Sordariomycetidae › Sordariales › Sordariaceae › Sordaria ›

Protein attributes

Sequence length678 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 F-box domain. RuleBase RU004534

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CCC12245.1

Ontologies

Keywords
   DomainRepeat RuleBase RU003532
WD repeat RuleBase RU000362
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
F7W3T6 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 5BFFBE2002DF4C2F

FASTA67875,150
        10         20         30         40         50         60 
MSLPYGKHQS ISERRGSVLG EELSLNTHSA KLAQQHRPQP PLTPLGMNPS ADFNQQLSAG 

        70         80         90        100        110        120 
SPPPPPTPAA SPGPSQTQPD WSNTEDDESI VLSIMRENFL KATTPEKKRI LEDIVNMCNS 

       130        140        150        160        170        180 
QQLSFILQLV SPRLKKDPMM ILPDELCLRV LSFIDDPRDL ARASQVSRRW RDLVSDDMTW 

       190        200        210        220        230        240 
KNLCLKHDYQ RRLSEVQTSM QYSNFLRPDP PSSFYQPYSA PATSVTFDDA MSLRRPRSYK 

       250        260        270        280        290        300 
SHFKQRYLVD AAWRTGGRNI TKNITQEGGV VTSLHLTKKY IIVALDNTKI HVFDTEGNEL 

       310        320        330        340        350        360 
RTLRGHMMGV WAMVPWDDVL VSGGCDRDVR VWDLTTGVCM HTLRGHTSTV RCLKMSDANT 

       370        380        390        400        410        420 
AISGSRDTTL RVWDIRNGVC RNVLVGHQAS VRCLEIHGDI VVSGSYDTTA KVWSISEGRC 

       430        440        450        460        470        480 
LHTLSGHYSQ IYAIAFDGYR VATGSLDTSV RIWNAATGEC QAVLQGHTSL VGQLQMRGGT 

       490        500        510        520        530        540 
LVTGGSDGSV RVWSLEKMCP IHRLAAHDNS VTSLQFDDTR IVSGGSDGRV KVWDLKTGQL 

       550        560        570        580        590        600 
VRELISQGEA VWRVAFEAEK CVAMALRNSR TVMEVWSFSP PEDVFLDRHE RQPFTLTPRP 

       610        620        630        640        650        660 
TIEAPVPERP SSAVGDSLIG NGMQDVDMPD AGPATAPLRP NASFFQASRG LEIKEEGTHT 

       670 
PFGHSISSAI IAGGYQRA

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References

[1]"De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis."
Nowrousian M., Stajich J., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.C., Osiewacz H.D., Poeggeler S., Read N., Seiler S., Smith K., Zickler D., Kueck U., Freitag M.
PLoS Genet. 6:e1000891-e1000891(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hell.
Tissue: Mycelium EMBL CCC12245.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CABT02000025 Genomic DNA. Translation: CCC12245.1.
RefSeqXP_003346423.1. XM_003346375.1.

3D structure databases

ProteinModelPortalF7W3T6.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID10803806.
KEGGsmp:SMAC_05318.

Phylogenomic databases

KOK03361.

Family and domain databases

Gene3D2.130.10.10. 2 hits.
InterProIPR001810. F-box_dom_cyclin-like.
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamPF00400. WD40. 6 hits.
[Graphical view]
PRINTSPR00320. GPROTEINBRPT.
SMARTSM00256. FBOX. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view]
SUPFAMSSF81383. F-box_dom_Skp2-like. 1 hit.
SSF50978. WD40_like. 1 hit.
PROSITEPS50181. FBOX. 1 hit.
PS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7W3T6_SORMK
AccessionPrimary (citable) accession number: F7W3T6
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: March 6, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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