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Protein

Glutamate decarboxylase

Gene

SMAC_01357

Organism
Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:SMAC_01357Imported
OrganismiSordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)Imported
Taxonomic identifieri771870 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesSordariaceaeSordaria
ProteomesiUP000001881 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:SMAC_01357.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiF7VQK9.
KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F7VQK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLSHHVDPE EIVHHLRDIK LQEKGSSSQK QNHLTPYTSS YASQEDIPKY
60 70 80 90 100
KIPEDGTPGD TVYAMLRDEL DLDGRPNLNM ASFVNTYIEE NAQKLFVENL
110 120 130 140 150
GKNMSDNDEY PAMISFSDRC VSILAHLWGV QKGEKAIGTA TVGSSEAVHL
160 170 180 190 200
GGLAMKRRWQ EKRWAEGKDA YKPNIIMGAN AQVALEKFAR YFDVEARILP
210 220 230 240 250
VSAKSNYCLD PELVKENLDE NTIGVFIILG STYTGHYEPV EEIHKILDDF
260 270 280 290 300
EAKTGIDIPI HVDAASGGFV APFTYAKTGG QKWNFELPRV KSINVSGHKY
310 320 330 340 350
GLVTPGVGWI VWRDESFLPK HLIFELHYLG GTEYSYTLNF SRPGAQVIVQ
360 370 380 390 400
YYNLIHLGFK GYREVVENCL SNARLLSKAL EATGWYTCAS DIHRPPKKQA
410 420 430 440 450
SGTAGLSGAD DSKKNDQSSG NENNDQKAEK EESKTHASDS KDASKDKDRE
460 470 480 490 500
ETSADYTPGL PVVSFRFTDE FKKEYPHVKQ ETVSLLMRAR QWIIPNYALP
510 520 530 540 550
PNEDQTEILR VVIRESFSFD LIDRLVTDLV SVTETLMEND EVDLSVLQGN
560 570 580 590 600
QGGRRKPVTK QDKKKQKEEK EKEEKKGEEK GEKKGEEKGE KKGEEKGKAE
610
EKKKEEKKRL GGGIHRSVC
Length:619
Mass (Da):69,672
Last modified:September 21, 2011 - v1
Checksum:i3BB79385A5176049
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABT02000004 Genomic DNA. Translation: CCC07791.1.
RefSeqiXP_003352523.1. XM_003352475.1.

Genome annotation databases

GeneIDi10810150.
KEGGismp:SMAC_01357.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABT02000004 Genomic DNA. Translation: CCC07791.1.
RefSeqiXP_003352523.1. XM_003352475.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10810150.
KEGGismp:SMAC_01357.

Organism-specific databases

EuPathDBiFungiDB:SMAC_01357.

Phylogenomic databases

InParanoidiF7VQK9.
KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis."
    Nowrousian M., Stajich J.E., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.-C., Osiewacz H.D., Poeggeler S., Read N.D., Seiler S., Smith K.M., Zickler D., Kueck U., Freitag M.
    PLoS Genet. 6:E1000891-E1000891(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hellImported.
    Tissue: MyceliumImported.

Entry informationi

Entry nameiF7VQK9_SORMK
AccessioniPrimary (citable) accession number: F7VQK9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 29, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.