Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

WGS project CABT00000000 data, contig 2.1

Gene

SMAC_00334

Organism
Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
WGS project CABT00000000 data, contig 2.1Imported
Gene namesi
ORF Names:SMAC_00334Imported
OrganismiSordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)Imported
Taxonomic identifieri771870 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesSordariaceaeSordaria
ProteomesiUP000001881: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliF7VKU0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiF7VKU0.
KOiK04564.
OrthoDBiEOG75B8GQ.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 2 hits.

Sequencei

Sequence statusi: Complete.

F7VKU0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIGSMGLRIP RATSSLLGRA VNAAAAATNQ SAAVAGASVA AQRRWQHYLM
60 70 80 90 100
KLRDNFEEKG IPNFLSPGSV NMAYTEYQTF ILEKLNALVV GTDFEQKDTK
110 120 130 140 150
SIILATARDP ELAHVFNHAS MAHNNHFFFD HLSPAPVKMG DKLFYHINEN
160 170 180 190 200
FGSVDTLRDE MIGTAVSMFG PGFVWLVRTQ LPGQPVALRV MATYLAGSPY
210 220 230 240 250
PGAHWRRQEV DTQTAIGNSP QGLANGQRLL ERSAAGFKGQ KLESTAPGGT
260 270 280 290 300
DLIPILCLNT WEYAWLREYG TGVGGMGGKL AYAQSWWNMI DWAKVEEEAR
310 320
LEARILTGGE GSVAPLASLL
Length:320
Mass (Da):34,914
Last modified:September 21, 2011 - v1
Checksum:i888D1DA7193FA0C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABT02000001 Genomic DNA. Translation: CCC06117.1.
RefSeqiXP_003351789.1. XM_003351741.1.

Genome annotation databases

GeneIDi10809376.
KEGGismp:SMAC_00334.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABT02000001 Genomic DNA. Translation: CCC06117.1.
RefSeqiXP_003351789.1. XM_003351741.1.

3D structure databases

ProteinModelPortaliF7VKU0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10809376.
KEGGismp:SMAC_00334.

Phylogenomic databases

InParanoidiF7VKU0.
KOiK04564.
OrthoDBiEOG75B8GQ.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis."
    Nowrousian M., Stajich J.E., Chu M., Engh I., Espagne E., Halliday K., Kamerewerd J., Kempken F., Knab B., Kuo H.-C., Osiewacz H.D., Poeggeler S., Read N.D., Seiler S., Smith K.M., Zickler D., Kueck U., Freitag M.
    PLoS Genet. 6:E1000891-E1000891(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC MYA-333 / DSM 997 / K(L3346) / K-hellImported.
    Tissue: MyceliumImported.

Entry informationi

Entry nameiF7VKU0_SORMK
AccessioniPrimary (citable) accession number: F7VKU0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: January 7, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.