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F7V7Z8 (F7V7Z8_CLOSS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:TufB EMBL BAK46258.1
Synonyms:tuf HAMAP-Rule MF_00118 EMBL BAK46258.1
Ordered Locus Names:CXIVA_02910 EMBL BAK46258.1
OrganismClostridium sp. (strain SY8519) [Complete proteome] [HAMAP]
Taxonomic identifier1042156 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F7V7Z8 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 8D798C20ACBE2F76

FASTA39543,741
        10         20         30         40         50         60 
MAKEKFERSK PHCNIGTIGH VDHGKTTLTA AITKVLAARV EGNSVVDFEN IDKAPEERER 

        70         80         90        100        110        120 
GITISTAHVE YETEKRHYAH VDCPGHADYV KNMITGAAQM DGAILVVAAT DGVMAQTKEH 

       130        140        150        160        170        180 
ILLSRQVGVP YIIVFLNKCD MVDDEELIEL VEMEVTEVLE EYGFHDCPII KGSALKALED 

       190        200        210        220        230        240 
PNGEWGDKIM ELMDVVDSYI PDPQRDTDKP FLMPVEDVFT ITGRGTVATG RVERGTLHIN 

       250        260        270        280        290        300 
EEVEIVGIKE ETQKTTVTGI EMFRKLLDEA QAGDNIGALL RGIKREQIER GQVLAAPGTV 

       310        320        330        340        350        360 
TCHHKFTAQV YVLTKDEGGR HTPFFNNYRP QFYFRTTDVT GVCMLPEGTE MCMPGDNVEM 

       370        380        390 
TIDLIHPVAM EQGLTFAIRE GGHTVGSGRV ATIIE 

« Hide

References

[1]"Complete genomic sequence of the O-desmethylangolensin-producing bacterium Clostridium rRNA cluster XIVa strain SY8519, isolated from adult human intestine."
Yokoyama S., Oshima K., Nomura I., Hattori M., Suzuki T.
J. Bacteriol. 193:5568-5569(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SY8519.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012212 Genomic DNA. Translation: BAK46258.1.
RefSeqYP_004707360.1. NC_015737.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK46258; BAK46258; CXIVA_02910.
GeneID10924244.
KEGGcls:CXIVA_02910.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycCSP1042156:GHDR-313-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7V7Z8_CLOSS
AccessionPrimary (citable) accession number: F7V7Z8
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: June 11, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)