F7UWD5 (F7UWD5_EEGSY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L16 RuleBase RU004414 HAMAP-Rule MF_01342

Gene names

Name:	RplP EMBL BAK45508.1
Synonyms:	rplP HAMAP-Rule MF_01342
Ordered Locus Names:	EGYY_24390 EMBL BAK45508.1

Organism

Eggerthella sp. (strain YY7918) [Complete proteome] [HAMAP]

Taxonomic identifier

502558 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Coriobacteridae › Coriobacteriales › Coriobacterineae › Coriobacteriaceae › Eggerthella

Protein attributes

Sequence length	140 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs By similarity. RuleBase RU004414 HAMAP-Rule MF_01342
Subunit structure	Part of the 50S ribosomal subunit By similarity. RuleBase RU004414 HAMAP-Rule MF_01342
Sequence similarities	Belongs to the ribosomal protein L16P family. HAMAP-Rule MF_01342

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding RuleBase RU004414 HAMAP-Rule MF_01342 tRNA-binding RuleBase RU004414 HAMAP-Rule MF_01342
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU004413 HAMAP-Rule MF_01342 EMBL BAK45508.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F7UWD5 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 4D4DC0F13E3A4C6F	FASTA	140	15,606
	10 20 30 40 50 60 MLVPKRVKHR KVQRGSMKGK AKGGTRLNHG TYGIQALEAH WITNRQIEAA RIAMTRHMKR 70 80 90 100 110 120 GGKVWITIFP DKPITQKPAE TRMGSGKGNP EAWVAVVKPG RIMFEIDGVD EATAKEALRL 130 140 AINKLPIKCK IVSKETEGQE

References

[1]

"Complete genome sequence of the equol-producing bacterium Eggerthella sp. strain YY7918 isolated from adult human intestine." Yokoyama S., Oshima K., Nomura I., Hattori M., Suzuki T. Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: YY7918.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP012211 Genomic DNA. Translation: BAK45508.1.
RefSeq	YP_004711909.1. NC_015738.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAK45508; BAK45508; EGYY_24390.
GeneID	10929230.
KEGG	eyy:EGYY_24390.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K02878.
Enzyme and pathway databases
BioCyc	ESP502558:GI1S-2516-MONOMER.
Family and domain databases
HAMAP	MF_01342. Ribosomal_L16.
InterPro	IPR016180. Ribosomal_L10e/L16. IPR000114. Ribosomal_L16. IPR020798. Ribosomal_L16_CS. [Graphical view]
PANTHER	PTHR12220. PTHR12220. 1 hit.
Pfam	PF00252. Ribosomal_L16. 1 hit. [Graphical view]
PRINTS	PR00060. RIBOSOMALL16.
SUPFAM	SSF54686. Ribosomal_L10e/L16. 1 hit.
TIGRFAMs	TIGR01164. rplP_bact. 1 hit.
PROSITE	PS00701. RIBOSOMAL_L16_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F7UWD5_EEGSY

Accession

Primary (citable) accession number: F7UWD5

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)