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F7UT50 (F7UT50_SYNYG) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length400 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site651Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2931Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1641Substrate By similarity HAMAP-Rule MF_01201
Binding site3411Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue651N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
F7UT50 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: D95897AB78849AC9

FASTA40043,692
        10         20         30         40         50         60 
MVLSRDVKSS PEQASRVSST LSGYRLAELI RQRAWVEIDQ AALVHNVRQF RQYVGPKTNL 

        70         80         90        100        110        120 
MAVVKADAYG HGAVRVAQTA LQAGADWLAI ATLGEGIELR EAGITAPILL LGGINSPEEI 

       130        140        150        160        170        180 
EAIAHWRLQP TLCSPEQAQL FNDILLKLGK VLPVHLKLDT GMTRLGTPWP QAANFVGLVQ 

       190        200        210        220        230        240 
SLPQLRLASL YSHLATADDP NTATMLQQQE RFAKAIASLR QARLPIPKLH LANSAATLHG 

       250        260        270        280        290        300 
QAWHYDMVRV GLGLYGLYPA PHLGDCLDLK PVLTVRAKIT QIRTIPPGTG VSYGHQFVSE 

       310        320        330        340        350        360 
ETMPMAVVGI GYADGVPRNL SNQLEVLLRG QPVRQIGAIT MDQMMVDLRG IDDPQVGEVV 

       370        380        390        400 
TLIGQDGDRQ ITADHWASTL GTISWEILCG FKHRLPRILI 

« Hide

References

[1]"Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S."
Tajima N., Sato S., Maruyama F., Kaneko T., Sasaki N.V., Kurokawa K., Ohta H., Kanesaki Y., Yoshikawa H., Tabata S., Ikeuchi M., Sato N.
DNA Res. 18:393-399(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / GT-S.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012205 Genomic DNA. Translation: BAK51296.1.
RefSeqNP_442440.1. NC_000911.1.
YP_005652501.1. NC_017277.1.
YP_007452316.1. NC_020286.1.

3D structure databases

ProteinModelPortalF7UT50.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK51296; BAK51296; SYNGTS_2548.
GeneID12253813.
14617997.
954380.
KEGGsyn:slr0827.
syy:SYNGTS_2548.
syz:MYO_125730.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycSSP1148:GJOT-2593-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7UT50_SYNYG
AccessionPrimary (citable) accession number: F7UT50
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: February 19, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)