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F7UT50

- F7UT50_SYNYG

UniProt

F7UT50 - F7UT50_SYNYG

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Protein

Alanine racemase

Gene

SYNGTS_2548

Organism
Synechocystis sp. (strain PCC 6803 / GT-S)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotation

Cofactori

Pyridoxal phosphate.UniRule annotationSAAS annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei65 – 651Proton acceptor; specific for D-alanineUniRule annotation
Binding sitei164 – 1641SubstrateUniRule annotation
Active sitei293 – 2931Proton acceptor; specific for L-alanineUniRule annotation
Binding sitei341 – 3411Substrate; via amide nitrogenUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciSSP1148:GJOT-2593-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:SYNGTS_2548Imported
OrganismiSynechocystis sp. (strain PCC 6803 / GT-S)Imported
Taxonomic identifieri1111707 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000008187: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei65 – 651N6-(pyridoxal phosphate)lysineUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliF7UT50.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the alanine racemase family.UniRule annotation

Phylogenomic databases

KOiK01775.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F7UT50-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVLSRDVKSS PEQASRVSST LSGYRLAELI RQRAWVEIDQ AALVHNVRQF
60 70 80 90 100
RQYVGPKTNL MAVVKADAYG HGAVRVAQTA LQAGADWLAI ATLGEGIELR
110 120 130 140 150
EAGITAPILL LGGINSPEEI EAIAHWRLQP TLCSPEQAQL FNDILLKLGK
160 170 180 190 200
VLPVHLKLDT GMTRLGTPWP QAANFVGLVQ SLPQLRLASL YSHLATADDP
210 220 230 240 250
NTATMLQQQE RFAKAIASLR QARLPIPKLH LANSAATLHG QAWHYDMVRV
260 270 280 290 300
GLGLYGLYPA PHLGDCLDLK PVLTVRAKIT QIRTIPPGTG VSYGHQFVSE
310 320 330 340 350
ETMPMAVVGI GYADGVPRNL SNQLEVLLRG QPVRQIGAIT MDQMMVDLRG
360 370 380 390 400
IDDPQVGEVV TLIGQDGDRQ ITADHWASTL GTISWEILCG FKHRLPRILI
Length:400
Mass (Da):43,692
Last modified:September 21, 2011 - v1
Checksum:iD95897AB78849AC9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012205 Genomic DNA. Translation: BAK51296.1.
RefSeqiNP_442440.1. NC_000911.1.
YP_005652501.1. NC_017277.1.
YP_007452316.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAK51296; BAK51296; SYNGTS_2548.
GeneIDi954380.
KEGGisyn:slr0827.
syy:SYNGTS_2548.
syz:MYO_125730.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012205 Genomic DNA. Translation: BAK51296.1 .
RefSeqi NP_442440.1. NC_000911.1.
YP_005652501.1. NC_017277.1.
YP_007452316.1. NC_020286.1.

3D structure databases

ProteinModelPortali F7UT50.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAK51296 ; BAK51296 ; SYNGTS_2548 .
GeneIDi 954380.
KEGGi syn:slr0827.
syy:SYNGTS_2548.
syz:MYO_125730.

Phylogenomic databases

KOi K01775.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci SSP1148:GJOT-2593-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S."
    Tajima N., Sato S., Maruyama F., Kaneko T., Sasaki N.V., Kurokawa K., Ohta H., Kanesaki Y., Yoshikawa H., Tabata S., Ikeuchi M., Sato N.
    DNA Res. 18:393-399(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / GT-SImported.

Entry informationi

Entry nameiF7UT50_SYNYG
AccessioniPrimary (citable) accession number: F7UT50
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 29, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3