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F7UT50 (F7UT50_SYNYG) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Ordered Locus Names:SYNGTS_2548 EMBL BAK51296.1
OrganismSynechocystis sp. (strain PCC 6803 / GT-S) [Complete proteome] [HAMAP]
Taxonomic identifier1111707 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechocystis ›

Protein attributes

Sequence length400 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F7UT50 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: D95897AB78849AC9

FASTA40043,692
        10         20         30         40         50         60 
MVLSRDVKSS PEQASRVSST LSGYRLAELI RQRAWVEIDQ AALVHNVRQF RQYVGPKTNL 

        70         80         90        100        110        120 
MAVVKADAYG HGAVRVAQTA LQAGADWLAI ATLGEGIELR EAGITAPILL LGGINSPEEI 

       130        140        150        160        170        180 
EAIAHWRLQP TLCSPEQAQL FNDILLKLGK VLPVHLKLDT GMTRLGTPWP QAANFVGLVQ 

       190        200        210        220        230        240 
SLPQLRLASL YSHLATADDP NTATMLQQQE RFAKAIASLR QARLPIPKLH LANSAATLHG 

       250        260        270        280        290        300 
QAWHYDMVRV GLGLYGLYPA PHLGDCLDLK PVLTVRAKIT QIRTIPPGTG VSYGHQFVSE 

       310        320        330        340        350        360 
ETMPMAVVGI GYADGVPRNL SNQLEVLLRG QPVRQIGAIT MDQMMVDLRG IDDPQVGEVV 

       370        380        390        400 
TLIGQDGDRQ ITADHWASTL GTISWEILCG FKHRLPRILI

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References

[1]"Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S."
Tajima N., Sato S., Maruyama F., Kaneko T., Sasaki N.V., Kurokawa K., Ohta H., Kanesaki Y., Yoshikawa H., Tabata S., Ikeuchi M., Sato N.
DNA Res. 18:393-399(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / GT-S.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP012205 Genomic DNA. Translation: BAK51296.1.
RefSeqNP_442440.1. NC_000911.1.
YP_005652501.1. NC_017277.1.
YP_007452316.1. NC_020286.1.

3D structure databases

ProteinModelPortalF7UT50.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK51296; BAK51296; SYNGTS_2548.
GeneID12253813.
14617997.
954380.
KEGGsyn:slr0827.
syy:SYNGTS_2548.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7UT50_SYNYG
AccessionPrimary (citable) accession number: F7UT50
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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