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F7URZ3

- F7URZ3_SYNYG

UniProt

F7URZ3 - F7URZ3_SYNYG

Protein

50S ribosomal protein L20

Gene

rplT

Organism
Synechocystis sp. (strain PCC 6803 / GT-S)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-KW
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Keywords - Ligandi

    RNA-binding, rRNA-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciSSP1148:GJOT-2188-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L20UniRule annotation
    Gene namesi
    Name:rplTUniRule annotationImported
    Synonyms:rpl20UniRule annotation
    Ordered Locus Names:SYNGTS_2157Imported
    OrganismiSynechocystis sp. (strain PCC 6803 / GT-S)Imported
    Taxonomic identifieri1111707 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000008187: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Structurei

    3D structure databases

    ProteinModelPortaliF7URZ3.
    SMRiF7URZ3. Positions 3-116.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L20P family.UniRule annotation

    Phylogenomic databases

    KOiK02887.

    Family and domain databases

    HAMAPiMF_00382. Ribosomal_L20.
    InterProiIPR005813. Ribosomal_L20.
    [Graphical view]
    PANTHERiPTHR10986. PTHR10986. 1 hit.
    PfamiPF00453. Ribosomal_L20. 1 hit.
    [Graphical view]
    PRINTSiPR00062. RIBOSOMALL20.
    TIGRFAMsiTIGR01032. rplT_bact. 1 hit.
    PROSITEiPS00937. RIBOSOMAL_L20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F7URZ3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTRVKRGNVA RKRRKKILKL AKGFRGSHSK LFRTANQQVM KALRNAYRDR    50
    RKRKRDFRRL WITRINAAAR QEGMSYSKLT GQLKKANIEI NRKMLAQLAV 100
    LDPAAFSEVV KVAATAK 117
    Length:117
    Mass (Da):13,553
    Last modified:September 21, 2011 - v1
    Checksum:i76664A15C1605292
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012205 Genomic DNA. Translation: BAK50905.1.
    RefSeqiNP_442051.1. NC_000911.1.
    YP_005652110.1. NC_017277.1.
    YP_007451930.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAK50905; BAK50905; SYNGTS_2157.
    GeneIDi952731.
    KEGGisyn:sll0767.
    syy:SYNGTS_2157.
    syz:MYO_121770.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012205 Genomic DNA. Translation: BAK50905.1 .
    RefSeqi NP_442051.1. NC_000911.1.
    YP_005652110.1. NC_017277.1.
    YP_007451930.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali F7URZ3.
    SMRi F7URZ3. Positions 3-116.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAK50905 ; BAK50905 ; SYNGTS_2157 .
    GeneIDi 952731.
    KEGGi syn:sll0767.
    syy:SYNGTS_2157.
    syz:MYO_121770.

    Phylogenomic databases

    KOi K02887.

    Enzyme and pathway databases

    BioCyci SSP1148:GJOT-2188-MONOMER.

    Family and domain databases

    HAMAPi MF_00382. Ribosomal_L20.
    InterProi IPR005813. Ribosomal_L20.
    [Graphical view ]
    PANTHERi PTHR10986. PTHR10986. 1 hit.
    Pfami PF00453. Ribosomal_L20. 1 hit.
    [Graphical view ]
    PRINTSi PR00062. RIBOSOMALL20.
    TIGRFAMsi TIGR01032. rplT_bact. 1 hit.
    PROSITEi PS00937. RIBOSOMAL_L20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S."
      Tajima N., Sato S., Maruyama F., Kaneko T., Sasaki N.V., Kurokawa K., Ohta H., Kanesaki Y., Yoshikawa H., Tabata S., Ikeuchi M., Sato N.
      DNA Res. 18:393-399(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / GT-SImported.

    Entry informationi

    Entry nameiF7URZ3_SYNYG
    AccessioniPrimary (citable) accession number: F7URZ3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3