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F7URZ3 (F7URZ3_SYNYG) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
50S ribosomal protein L20 RuleBase RU000560 HAMAP-Rule MF_00382
Gene names
Name:rplT HAMAP-Rule MF_00382 EMBL BAK50905.1
Synonyms:rpl20 HAMAP-Rule MF_00382
Ordered Locus Names:SYNGTS_2157 EMBL BAK50905.1
OrganismSynechocystis sp. (strain PCC 6803 / GT-S) [Complete proteome] [HAMAP]
Taxonomic identifier1111707 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length117 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. RuleBase RU000560 HAMAP-Rule MF_00382

Sequence similarities

Belongs to the ribosomal protein L20P family. RuleBase RU000560 HAMAP-Rule MF_00382

Sequences

Sequence LengthMass (Da)Tools
F7URZ3 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 76664A15C1605292

FASTA11713,553
        10         20         30         40         50         60 
MTRVKRGNVA RKRRKKILKL AKGFRGSHSK LFRTANQQVM KALRNAYRDR RKRKRDFRRL 

        70         80         90        100        110 
WITRINAAAR QEGMSYSKLT GQLKKANIEI NRKMLAQLAV LDPAAFSEVV KVAATAK 

« Hide

References

[1]"Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S."
Tajima N., Sato S., Maruyama F., Kaneko T., Sasaki N.V., Kurokawa K., Ohta H., Kanesaki Y., Yoshikawa H., Tabata S., Ikeuchi M., Sato N.
DNA Res. 18:393-399(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / GT-S.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012205 Genomic DNA. Translation: BAK50905.1.
RefSeqNP_442051.1. NC_000911.1.
YP_005652110.1. NC_017277.1.
YP_007451930.1. NC_020286.1.

3D structure databases

ProteinModelPortalF7URZ3.
SMRF7URZ3. Positions 3-116.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK50905; BAK50905; SYNGTS_2157.
GeneID12253322.
14617599.
952731.
KEGGsyn:sll0767.
syy:SYNGTS_2157.
syz:MYO_121770.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02887.

Enzyme and pathway databases

BioCycSSP1148:GJOT-2188-MONOMER.

Family and domain databases

HAMAPMF_00382. Ribosomal_L20.
InterProIPR005813. Ribosomal_L20.
[Graphical view]
PANTHERPTHR10986. PTHR10986. 1 hit.
PfamPF00453. Ribosomal_L20. 1 hit.
[Graphical view]
PRINTSPR00062. RIBOSOMALL20.
TIGRFAMsTIGR01032. rplT_bact. 1 hit.
PROSITEPS00937. RIBOSOMAL_L20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7URZ3_SYNYG
AccessionPrimary (citable) accession number: F7URZ3
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: February 19, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)