F7URZ3 (F7URZ3_SYNYG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L20 RuleBase RU000560 HAMAP-Rule MF_00382

Gene names

Name:	rplT HAMAP-Rule MF_00382
Synonyms:	rpl20 HAMAP-Rule MF_00382
Ordered Locus Names:	SYNGTS_2157 EMBL BAK50905.1

Organism

Synechocystis sp. (strain PCC 6803 / GT-S) [Complete proteome] [HAMAP]

Taxonomic identifier

1111707 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechocystis › Synechocystis sp. PCC 6803

Protein attributes

Sequence length	117 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. RuleBase RU000560 HAMAP-Rule MF_00382
Sequence similarities	Belongs to the ribosomal protein L20P family. RuleBase RU000560 HAMAP-Rule MF_00382

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding RuleBase RU000560 HAMAP-Rule MF_00382
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU000560 HAMAP-Rule MF_00382 EMBL BAK50905.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ribosomal large subunit assembly Inferred from electronic annotation. Source: HAMAP translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F7URZ3 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 76664A15C1605292	FASTA	117	13,553
	10 20 30 40 50 60 MTRVKRGNVA RKRRKKILKL AKGFRGSHSK LFRTANQQVM KALRNAYRDR RKRKRDFRRL 70 80 90 100 110 WITRINAAAR QEGMSYSKLT GQLKKANIEI NRKMLAQLAV LDPAAFSEVV KVAATAK

References

[1]

"Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S." Tajima N., Sato S., Maruyama F., Kaneko T., Sasaki N.V., Kurokawa K., Ohta H., Kanesaki Y., Yoshikawa H., Tabata S., Ikeuchi M., Sato N. DNA Res. 18:393-399(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PCC 6803 / GT-S.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP012205 Genomic DNA. Translation: BAK50905.1.
RefSeq	NP_442051.1. NC_000911.1. YP_005652110.1. NC_017277.1. YP_007451930.1. NC_020286.1.
3D structure databases
ProteinModelPortal	F7URZ3.
SMR	F7URZ3. Positions 3-116.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAK50905; BAK50905; SYNGTS_2157.
GeneID	12253322. 14617599. 952731.
KEGG	syn:sll0767. syy:SYNGTS_2157.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K02887.
Family and domain databases
HAMAP	MF_00382. Ribosomal_L20.
InterPro	IPR005813. Ribosomal_L20. [Graphical view]
PANTHER	PTHR10986. PTHR10986. 1 hit.
Pfam	PF00453. Ribosomal_L20. 1 hit. [Graphical view]
PRINTS	PR00062. RIBOSOMALL20.
TIGRFAMs	TIGR01032. rplT_bact. 1 hit.
PROSITE	PS00937. RIBOSOMAL_L20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F7URZ3_SYNYG

Accession

Primary (citable) accession number: F7URZ3

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)