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F7UQG7

- F7UQG7_SYNYG

UniProt

F7UQG7 - F7UQG7_SYNYG

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Protein

GTPase Der

Gene
slr1974, der, SYNGTS_1631
Organism
Synechocystis sp. (strain PCC 6803 / GT-S)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

GTPase that plays an essential role in the late steps of ribosome biogenesis By similarity.UniRule annotationSAAS annotations

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi10 – 178GTP 1 By similarityUniRule annotation
Nucleotide bindingi57 – 615GTP 1 By similarityUniRule annotation
Nucleotide bindingi120 – 1234GTP 1 By similarityUniRule annotation
Nucleotide bindingi183 – 1908GTP 2 By similarityUniRule annotation
Nucleotide bindingi230 – 2345GTP 2 By similarityUniRule annotation
Nucleotide bindingi295 – 2984GTP 2 By similarityUniRule annotation

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-HAMAP
  2. nucleoside-triphosphatase activity Source: InterPro

GO - Biological processi

  1. ribosome biogenesis Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Ribosome biogenesisUniRule annotationSAAS annotations

Keywords - Ligandi

GTP-bindingUniRule annotationSAAS annotations, Nucleotide-binding

Enzyme and pathway databases

BioCyciSSP1148:GJOT-1651-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
GTPase DerUniRule annotation
Alternative name(s):
GTP-binding protein EngA
Gene namesi
Name:slr1974Imported
Synonyms:derUniRule annotationImported
Ordered Locus Names:SYNGTS_1631Imported
OrganismiSynechocystis sp. (strain PCC 6803 / GT-S)
Taxonomic identifieri1111707 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000008187: Chromosome

Interactioni

Subunit structurei

Associates with the 50S ribosomal subunit By similarity.UniRule annotationSAAS annotations

Structurei

3D structure databases

ProteinModelPortaliF7UQG7.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 121116G 1 By similarityUniRule annotationAdd
BLAST
Domaini178 – 296119G 2 By similarityUniRule annotationAdd
BLAST
Domaini352 – 43988KH-like By similarityUniRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 KH-like domain.UniRule annotation
Contains EngA-type G (guanine nucleotide-binding) domains.SAAS annotations
Contains KH-like domain.SAAS annotations

Keywords - Domaini

RepeatUniRule annotationSAAS annotations

Phylogenomic databases

KOiK03977.

Family and domain databases

Gene3Di3.30.300.20. 1 hit.
3.40.50.300. 2 hits.
HAMAPiMF_00195. GTPase_Der.
InterProiIPR003593. AAA+_ATPase.
IPR016484. GTP-bd_EngA.
IPR006073. GTP_binding_domain.
IPR015946. KH_dom-like_a/b.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
[Graphical view]
PANTHERiPTHR11649:SF5. PTHR11649:SF5. 1 hit.
PfamiPF01926. MMR_HSR1. 2 hits.
[Graphical view]
PIRSFiPIRSF006485. GTP-binding_EngA. 1 hit.
PRINTSiPR00326. GTP1OBG.
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
TIGRFAMsiTIGR03594. GTPase_EngA. 1 hit.
TIGR00231. small_GTP. 2 hits.

Sequencei

Sequence statusi: Complete.

F7UQG7-1 [UniParc]FASTAAdd to Basket

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MSLPIVAIIG RPNVGKSTFV NRLAGNQQAI VHDQPGITRD RTYRPAFWRD    50
RDFQVVDTGG LVFNDDSEFL PEIREQANLA LAEAKAAIFV VDGQQGPTAS 100
DEEIAQWLRQ QSVPVILAVN KCESPDQGAI QAAEFWHLGL GEPYPMSAIH 150
GSGTGDLLDA LLEYLPAPQE EPEEDEIKVA IVGRPNVGKS SLLNALTGEQ 200
RAIVSPISGT TRDAIDMVVE RNGQKYRLID TAGIRRKKNV DYGAEFFGIN 250
RAFKAIRRAD VVLFVLDVLD GVTEQDLKLA GRIIEDGRAV VLVINKWDAV 300
EKDSYTIYEH REQLMARLYF MDWAEMIFVS AQTGLRVQKI LDCVDIAAQE 350
HRRRVTTAVI NEVLEEAVSW HSPPTTRQGK QGKIYYGTQV STQPPAIALF 400
VNDPNRFNDN YRRYIEKQFR KQLGFFGSPI RLFWRGKKVR EMEGSRNRAT 450
KV 452
Length:452
Mass (Da):50,826
Last modified:September 21, 2011 - v1
Checksum:i7FF771EAF7D6CC76
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012205 Genomic DNA. Translation: BAK50379.1.
RefSeqiNP_441526.1. NC_000911.1.
YP_005651584.1. NC_017277.1.
YP_007451408.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAK50379; BAK50379; SYNGTS_1631.
GeneIDi954938.
KEGGisyn:slr1974.
syy:SYNGTS_1631.
syz:MYO_116460.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012205 Genomic DNA. Translation: BAK50379.1 .
RefSeqi NP_441526.1. NC_000911.1.
YP_005651584.1. NC_017277.1.
YP_007451408.1. NC_020286.1.

3D structure databases

ProteinModelPortali F7UQG7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAK50379 ; BAK50379 ; SYNGTS_1631 .
GeneIDi 954938.
KEGGi syn:slr1974.
syy:SYNGTS_1631.
syz:MYO_116460.

Phylogenomic databases

KOi K03977.

Enzyme and pathway databases

BioCyci SSP1148:GJOT-1651-MONOMER.

Family and domain databases

Gene3Di 3.30.300.20. 1 hit.
3.40.50.300. 2 hits.
HAMAPi MF_00195. GTPase_Der.
InterProi IPR003593. AAA+_ATPase.
IPR016484. GTP-bd_EngA.
IPR006073. GTP_binding_domain.
IPR015946. KH_dom-like_a/b.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
[Graphical view ]
PANTHERi PTHR11649:SF5. PTHR11649:SF5. 1 hit.
Pfami PF01926. MMR_HSR1. 2 hits.
[Graphical view ]
PIRSFi PIRSF006485. GTP-binding_EngA. 1 hit.
PRINTSi PR00326. GTP1OBG.
SMARTi SM00382. AAA. 2 hits.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 2 hits.
TIGRFAMsi TIGR03594. GTPase_EngA. 1 hit.
TIGR00231. small_GTP. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S."
    Tajima N., Sato S., Maruyama F., Kaneko T., Sasaki N.V., Kurokawa K., Ohta H., Kanesaki Y., Yoshikawa H., Tabata S., Ikeuchi M., Sato N.
    DNA Res. 18:393-399(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / GT-S.

Entry informationi

Entry nameiF7UQG7_SYNYG
AccessioniPrimary (citable) accession number: F7UQG7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 9, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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