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F7UQG7

- F7UQG7_SYNYG

UniProt

F7UQG7 - F7UQG7_SYNYG

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Protein

GTPase Der

Gene

slr1974

Organism
Synechocystis sp. (strain PCC 6803 / GT-S)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GTPase that plays an essential role in the late steps of ribosome biogenesis.UniRule annotationSAAS annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi10 – 178GTP 1UniRule annotation
Nucleotide bindingi57 – 615GTP 1UniRule annotation
Nucleotide bindingi120 – 1234GTP 1UniRule annotation
Nucleotide bindingi183 – 1908GTP 2UniRule annotation
Nucleotide bindingi230 – 2345GTP 2UniRule annotation
Nucleotide bindingi295 – 2984GTP 2UniRule annotation

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. ribosome biogenesis Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Ribosome biogenesisUniRule annotationSAAS annotation

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciSSP1148:GJOT-1651-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
GTPase DerUniRule annotation
Alternative name(s):
GTP-binding protein EngAUniRule annotation
Gene namesi
Name:slr1974Imported
Synonyms:derUniRule annotationImported
Ordered Locus Names:SYNGTS_1631Imported
OrganismiSynechocystis sp. (strain PCC 6803 / GT-S)Imported
Taxonomic identifieri1111707 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000008187: Chromosome

Interactioni

Subunit structurei

Associates with the 50S ribosomal subunit.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliF7UQG7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 121116G 1UniRule annotationAdd
BLAST
Domaini178 – 296119G 2UniRule annotationAdd
BLAST
Domaini352 – 43988KH-likeUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.UniRule annotation
Contains 1 KH-like domain.UniRule annotation
Contains 2 G (guanine nucleotide-binding) domains.UniRule annotation
Contains EngA-type G (guanine nucleotide-binding) domains.SAAS annotation
Contains KH-like domain.SAAS annotation

Keywords - Domaini

RepeatUniRule annotation

Phylogenomic databases

KOiK03977.

Family and domain databases

Gene3Di3.30.300.20. 1 hit.
3.40.50.300. 2 hits.
HAMAPiMF_00195. GTPase_Der.
InterProiIPR003593. AAA+_ATPase.
IPR016484. GTP-bd_EngA.
IPR006073. GTP_binding_domain.
IPR015946. KH_dom-like_a/b.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
[Graphical view]
PANTHERiPTHR11649:SF5. PTHR11649:SF5. 1 hit.
PfamiPF01926. MMR_HSR1. 2 hits.
[Graphical view]
PIRSFiPIRSF006485. GTP-binding_EngA. 1 hit.
PRINTSiPR00326. GTP1OBG.
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
TIGRFAMsiTIGR03594. GTPase_EngA. 1 hit.
TIGR00231. small_GTP. 2 hits.

Sequencei

Sequence statusi: Complete.

F7UQG7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSLPIVAIIG RPNVGKSTFV NRLAGNQQAI VHDQPGITRD RTYRPAFWRD
60 70 80 90 100
RDFQVVDTGG LVFNDDSEFL PEIREQANLA LAEAKAAIFV VDGQQGPTAS
110 120 130 140 150
DEEIAQWLRQ QSVPVILAVN KCESPDQGAI QAAEFWHLGL GEPYPMSAIH
160 170 180 190 200
GSGTGDLLDA LLEYLPAPQE EPEEDEIKVA IVGRPNVGKS SLLNALTGEQ
210 220 230 240 250
RAIVSPISGT TRDAIDMVVE RNGQKYRLID TAGIRRKKNV DYGAEFFGIN
260 270 280 290 300
RAFKAIRRAD VVLFVLDVLD GVTEQDLKLA GRIIEDGRAV VLVINKWDAV
310 320 330 340 350
EKDSYTIYEH REQLMARLYF MDWAEMIFVS AQTGLRVQKI LDCVDIAAQE
360 370 380 390 400
HRRRVTTAVI NEVLEEAVSW HSPPTTRQGK QGKIYYGTQV STQPPAIALF
410 420 430 440 450
VNDPNRFNDN YRRYIEKQFR KQLGFFGSPI RLFWRGKKVR EMEGSRNRAT

KV
Length:452
Mass (Da):50,826
Last modified:September 21, 2011 - v1
Checksum:i7FF771EAF7D6CC76
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012205 Genomic DNA. Translation: BAK50379.1.
RefSeqiNP_441526.1. NC_000911.1.
YP_005651584.1. NC_017277.1.
YP_007451408.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAK50379; BAK50379; SYNGTS_1631.
GeneIDi954938.
KEGGisyn:slr1974.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012205 Genomic DNA. Translation: BAK50379.1 .
RefSeqi NP_441526.1. NC_000911.1.
YP_005651584.1. NC_017277.1.
YP_007451408.1. NC_020286.1.

3D structure databases

ProteinModelPortali F7UQG7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAK50379 ; BAK50379 ; SYNGTS_1631 .
GeneIDi 954938.
KEGGi syn:slr1974.

Phylogenomic databases

KOi K03977.

Enzyme and pathway databases

BioCyci SSP1148:GJOT-1651-MONOMER.

Family and domain databases

Gene3Di 3.30.300.20. 1 hit.
3.40.50.300. 2 hits.
HAMAPi MF_00195. GTPase_Der.
InterProi IPR003593. AAA+_ATPase.
IPR016484. GTP-bd_EngA.
IPR006073. GTP_binding_domain.
IPR015946. KH_dom-like_a/b.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
[Graphical view ]
PANTHERi PTHR11649:SF5. PTHR11649:SF5. 1 hit.
Pfami PF01926. MMR_HSR1. 2 hits.
[Graphical view ]
PIRSFi PIRSF006485. GTP-binding_EngA. 1 hit.
PRINTSi PR00326. GTP1OBG.
SMARTi SM00382. AAA. 2 hits.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 2 hits.
TIGRFAMsi TIGR03594. GTPase_EngA. 1 hit.
TIGR00231. small_GTP. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S."
    Tajima N., Sato S., Maruyama F., Kaneko T., Sasaki N.V., Kurokawa K., Ohta H., Kanesaki Y., Yoshikawa H., Tabata S., Ikeuchi M., Sato N.
    DNA Res. 18:393-399(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / GT-SImported.

Entry informationi

Entry nameiF7UQG7_SYNYG
AccessioniPrimary (citable) accession number: F7UQG7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: November 26, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3