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F7UKY1 (F7UKY1_SYNYG) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Asparagine--tRNA ligase HAMAP-Rule MF_00534
EC=6.1.1.22 HAMAP-Rule MF_00534
Alternative name(s):
Asparaginyl-tRNA synthetase HAMAP-Rule MF_00534
Gene names
Name:asnS HAMAP-Rule MF_00534
Ordered Locus Names:SYNGTS_2881 EMBL BAK51629.1
OrganismSynechocystis sp. (strain PCC 6803 / GT-S) [Complete proteome] [HAMAP]
Taxonomic identifier1111707 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechocystis ›

Protein attributes

Sequence length462 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn). HAMAP-Rule MF_00534 SAAS SAAS004522

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00534

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00534.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00534 RuleBase RU003746

Sequences

Sequence LengthMass (Da)Tools
F7UKY1 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 6E177B9BC0F25D1F

FASTA46252,699
        10         20         30         40         50         60 
MNKRRIIEVL RHGQADDQVM VQGWLRTKRT LKDFSFVEVN DGSSLANLQV VLDGSLADYD 

        70         80         90        100        110        120 
RLLSQLQTGA ALVVEGKLAP SPGKGQRVEL KATKLELLGG ADPGSYPLQK KRHSFEFLRT 

       130        140        150        160        170        180 
IGHLRPRTNT IGAVMRVRNA CATAIHQFFQ ERGFLWVHTP IITASDCEGA GDLFKVTTLD 

       190        200        210        220        230        240 
LQRVPKNGEG IDYSQDFFGK QAYLTVSGQL EAEVMALAFQ NVYTFGPTFR AENSNTSRHL 

       250        260        270        280        290        300 
AEFWMVEPEM AFCDLEGDRQ WAEEFLKYIF KFVLEKCPED MEFFDQRIDN TVLATADNII 

       310        320        330        340        350        360 
NNEFAWLTYS EAIKLLEKAD QKFEYPVAWG VDLQSEHERY LAETVFKRPT IVTDYPKDIK 

       370        380        390        400        410        420 
AFYMRLNDDG KTVAAMDILA PKIGEIIGGS QREERLDILT QRMQEQGVPE EDLWWYLDLR 

       430        440        450        460 
RYGSVPHAGF GLGFERIVQF MTGMANIRDV IPFPRTPMNA EF

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References

[1]"Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S."
Tajima N., Sato S., Maruyama F., Kaneko T., Sasaki N.V., Kurokawa K., Ohta H., Kanesaki Y., Yoshikawa H., Tabata S., Ikeuchi M., Sato N.
DNA Res. 18:393-399(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / GT-S.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP012205 Genomic DNA. Translation: BAK51629.1.
RefSeqNP_442773.2. NC_000911.1.
YP_005652834.1. NC_017277.1.

3D structure databases

ProteinModelPortalF7UKY1.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK51629; BAK51629; SYNGTS_2881.
GeneID12255108.
952103.
KEGGsyn:sll0495.
syy:SYNGTS_2881.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01893.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
HAMAPMF_00534. Asn_tRNA_synth.
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-ligase_IIb.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
PANTHERPTHR22594. PTHR22594. 1 hit.
PTHR22594:SF6. PTHR22594:SF6. 1 hit.
PfamPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00457. asnS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7UKY1_SYNYG
AccessionPrimary (citable) accession number: F7UKY1
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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