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F7PLF3 (F7PLF3_9EURY) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.4.99.16 EMBL ERJ04794.1

Trehalose synthase, family GH13 EMBL CCQ33065.1
EC=5.4.99.16 EMBL CCQ33065.1
Gene names
ORF Names:HLRTI_003230 EMBL ERJ04794.1, HTIA_0926 EMBL CCQ33065.1
OrganismHalorhabdus tiamatea SARL4B [Complete proteome] EMBL ERJ04794.1
Taxonomic identifier1033806 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHalorhabdus

Protein attributes

Sequence length534 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F7PLF3 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 1C42544BCD4F5129

FASTA53461,920
        10         20         30         40         50         60 
MTETPHDRIE RLWTDVYGTD HPEKRAELLD LLEERRENVA YTPDETDWYQ TGVVYSLYVD 

        70         80         90        100        110        120 
LFADDFDGLV EKLDYLEDLG VTVVWLLPVL ESPMVDQGFD VSDFTRVREE LGGNDAFLEF 

       130        140        150        160        170        180 
VEAAHDRGIK VVFDVPINHS SDQHRWFQNA RQSQSAEYRD YYIWNDDTDR YEEARLLLKG 

       190        200        210        220        230        240 
VSDSNWTENE PTDDYYFHRF YDVQPDLNYE NPDVLLEMLR ILTRWRVQGV DGFRLDAAPF 

       250        260        270        280        290        300 
LWKREGTNCE NLPETHAILK LFRAAFEYVA EGTVMIAEAN LEPDDVVEYF GDGDECHVAY 

       310        320        330        340        350        360 
NFPLMPTFFL ALAENDPTYV TDELASLESL DVPASAQWFT FLRVHDELTL EFVSPAERQL 

       370        380        390        400        410        420 
LNDAYLEDER WSFREGEGIS GRLYNLLDED PDRVLLAYSM LFSVEGTPIV YYGDEVGMEN 

       430        440        450        460        470        480 
DEAFHAEMNE RLGYDDSRYL HRGPFDEDRK RAAMTEEGSD AHAIWTGLGE MIETRTDNPD 

       490        500        510        520        530 
LFTATPTYRA ENGVFVSTRE TAGRRLSIYN NVTPEPRTVD GVELDGFDYA WVLE 

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References

[1]"Genome sequence of Halorhabdus tiamatea, the first archaeon isolated from a deep-sea anoxic brine lake."
Antunes A., Alam I., Bajic V.B., Stingl U.
J. Bacteriol. 193:4553-4554(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SARL4B EMBL ERJ04794.1.
[2]"INDIGO - INtegrated Data Warehouse of MIcrobial GenOmes with Examples from the Red Sea Extremophiles."
Alam I., Antunes A., Kamau A.A., Ba Alawi W., Kalkatawi M., Stingl U., Bajic V.B.
PLoS ONE 8:E82210-E82210(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SARL4B EMBL ERJ04794.1.
[3]"Halorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader."
Werner J., Ferrer M., Michel G., Mann A.J., Huang S., Juarez S., Ciordia S., Albar J.P., Alcaide M., La Cono V., Yakimov M.M., Antunes A., Taborda M., Da Costa M.S., Amann R.I., Gloeckner F.O., Golyshina O.V., Golyshin P.N., Teeling H.
Environ. Microbiol. 0:0-0(2014)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Type strain: SARL4B EMBL CCQ33065.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HF571520 Genomic DNA. Translation: CCQ33065.1.
AFNT02000056 Genomic DNA. Translation: ERJ04794.1.
RefSeqYP_008376376.1. NC_021921.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCQ33065; CCQ33065; HTIA_0926.
ERJ04794; ERJ04794; HLRTI_003230.
GeneID16486744.
KEGGhti:HTIA_0926.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D3.20.20.80. 2 hits.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameF7PLF3_9EURY
AccessionPrimary (citable) accession number: F7PLF3
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: June 11, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)