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Protein
Submitted name:

DNA-directed RNA polymerase II subunit RPB7

Gene

POLR2G

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-directed RNA polymerase II subunit RPB7Imported
Submitted name:
RNA polymerase II subunit GImported
Gene namesi
Name:POLR2GImported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix
Proteomesi
  • UP000008225 Componenti: Chromosome 11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

DNA-directed RNA polymeraseImported

Interactioni

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000034715

Structurei

3D structure databases

SMRiF7ID17
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini80 – 162S1InterPro annotationAdd BLAST83

Phylogenomic databases

eggNOGiKOG3298 Eukaryota
COG1095 LUCA
GeneTreeiENSGT00390000008975
KOiK03015
OMAiMRQPGLG
OrthoDBiEOG091G0MF6
TreeFamiTF103042

Family and domain databases

Gene3Di3.30.1490.120, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR036898 RNA_pol_Rpb7-like_N_sf
IPR005576 RNA_pol_Rpb7_N
IPR022967 S1_dom
IPR003029 S1_domain
PfamiView protein in Pfam
PF00575 S1, 1 hit
PF03876 SHS2_Rpb7-N, 1 hit
SMARTiView protein in SMART
SM00316 S1, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
SSF88798 SSF88798, 1 hit

Sequencei

Sequence statusi: Complete.

F7ID17-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFYHISLEHE ILLHPRYFGP NLLNTVKQKL FTEVEGTCTG KYGFVIAVTT
60 70 80 90 100
IDNIGAGVIQ PGRGFVLYPV KYKAIVFRPF KGEVVDAVVT QVNKVGLFTE
110 120 130 140 150
IGPMSCFISR HSIPSEMEFD PNSNPPCYKT MDEDIVIQQD DEIRLKIVGT
160 170
RVDKNDIFAI GSLMDDYLGL VS
Length:172
Mass (Da):19,294
Last modified:July 27, 2011 - v1
Checksum:iAF3CE655F658CD5C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACFV01109458 Genomic DNA No translation available.
GAMT01008047 mRNA Translation: JAB03814.1
GAMT01008046 mRNA Translation: JAB03815.1
GAMS01006883 mRNA Translation: JAB16253.1
GAMS01006882 mRNA Translation: JAB16254.1
GAMR01005569 mRNA Translation: JAB28363.1
GAMR01005568 mRNA Translation: JAB28364.1
GAMQ01005054 mRNA Translation: JAB36797.1
GAMP01010763 mRNA Translation: JAB41992.1
GAMP01010762 mRNA Translation: JAB41993.1
GAMP01010761 mRNA Translation: JAB41994.1
RefSeqiXP_002755481.1, XM_002755435.4

Genome annotation databases

EnsembliENSCJAT00000036662; ENSCJAP00000034715; ENSCJAG00000018688
GeneIDi100398629
KEGGicjc:100398629

Similar proteinsi

Entry informationi

Entry nameiF7ID17_CALJA
AccessioniPrimary (citable) accession number: F7ID17
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 25, 2018
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health