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Protein
Submitted name:

Rho guanine nucleotide exchange factor 39

Gene

ARHGEF39

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Rho guanine nucleotide exchange factor 39Imported
Gene namesi
Name:ARHGEF39Imported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix
Proteomesi
  • UP000008225 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000017572.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 197DHInterPro annotationAdd BLAST176
Domaini227 – 331PHInterPro annotationAdd BLAST105

Phylogenomic databases

eggNOGiENOG410IE9S. Eukaryota.
ENOG4110AJV. LUCA.
GeneTreeiENSGT00440000033863.
OMAiCPHLELY.
OrthoDBiEOG091G0DTO.
TreeFamiTF350447.

Family and domain databases

CDDicd00160. RhoGEF. 1 hit.
Gene3Di1.20.900.10. 1 hit.
2.30.29.30. 1 hit.
InterProiView protein in InterPro
IPR035899. DBL_dom_sf.
IPR000219. DH-domain.
IPR011993. PH-like_dom_sf.
IPR001849. PH_domain.
PfamiView protein in Pfam
PF00621. RhoGEF. 1 hit.
SMARTiView protein in SMART
SM00233. PH. 1 hit.
SM00325. RhoGEF. 1 hit.
SUPFAMiSSF48065. SSF48065. 1 hit.
SSF50729. SSF50729. 1 hit.
PROSITEiView protein in PROSITE
PS50010. DH_2. 1 hit.
PS50003. PH_DOMAIN. 1 hit.

Sequencei

Sequence statusi: Complete.

F7IA19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEILCSGARC PVQEQRTRWE RKRACTAREL LETERRYQEQ LGLVATYFLR
60 70 80 90 100
ILKAKGTLRP PERQALFGSW ELIYGASQEL LPYLEEGHWG QGLEGFCHHL
110 120 130 140 150
ELYNQFAANS ERSQTTLQEQ LKKNKGFRRF VRLQEGRPEF EGLQLQDLLS
160 170 180 190 200
LPLQRLQQYE NLIIALAENT GPNSPDHQQL TRAARLISET AQRVHAIGQK
210 220 230 240 250
QKNDQHLQRV QALLSGRQAK GLTSGRWFLH QGWLLVVPLH GEPRPRMFFL
260 270 280 290 300
FTDVLLMAKP RPPLHLLQSG TFACKALYPM AQCQLRRVFG HSGSPCGGLL
310 320 330
SLSFPHEKLL LMSTDQEELS RWYHSLTWAI NGRKN
Length:335
Mass (Da):38,627
Last modified:July 27, 2011 - v1
Checksum:i31D592E199577B50
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACFV01033852 Genomic DNA. No translation available.
ACFV01033853 Genomic DNA. No translation available.
GAMT01005460 mRNA. Translation: JAB06401.1.
GAMT01005459 mRNA. Translation: JAB06402.1.
GAMT01005458 mRNA. Translation: JAB06403.1.
GAMT01005457 mRNA. Translation: JAB06404.1.
RefSeqiXP_008997271.1. XM_008999023.2.

Genome annotation databases

EnsembliENSCJAT00000018585; ENSCJAP00000017572; ENSCJAG00000009573.
GeneIDi100404332.
KEGGicjc:100404332.

Similar proteinsi

Entry informationi

Entry nameiF7IA19_CALJA
AccessioniPrimary (citable) accession number: F7IA19
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: November 22, 2017
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported