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Protein
Submitted name:

Syntaxin 12

Gene

STX12

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Syntaxin 12Imported
Gene namesi
Name:STX12Imported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix
Proteomesi
  • UP000008225 Componenti: Chromosome 7

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei245 – 266HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini171 – 233T-SNARE coiled-coil homologyInterPro annotationAdd BLAST63

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili49 – 76Sequence analysisAdd BLAST28
Coiled coili157 – 177Sequence analysisAdd BLAST21
Coiled coili209 – 229Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the syntaxin family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotationSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00450000040239

Family and domain databases

InterProiView protein in InterPro
IPR010989 SNARE
IPR006012 Syntaxin/epimorphin_CS
IPR006011 Syntaxin_N
IPR000727 T_SNARE_dom
PfamiView protein in Pfam
PF05739 SNARE, 1 hit
PF14523 Syntaxin_2, 1 hit
SMARTiView protein in SMART
SM00503 SynN, 1 hit
SM00397 t_SNARE, 1 hit
SUPFAMiSSF47661 SSF47661, 1 hit
PROSITEiView protein in PROSITE
PS00914 SYNTAXIN, 1 hit
PS50192 T_SNARE, 1 hit

Sequencei

Sequence statusi: Complete.

F7I339-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYRNPGPSGP QLRDFSSIIQ TCSGNIQRIS QATAQIKNLM SQLGTKQDST
60 70 80 90 100
KLQENLQQLQ HSTNQLAKET NELLKELGSL PLPLSASEQR QQRLQKERLM
110 120 130 140 150
NDFSAALNNF QAVQRRVSEK EKESIARARA GSRLSAEERQ REEQLVSFDS
160 170 180 190 200
HEEWNQMQSQ EDEVAITEQD LELIKERETA IRQLEADILD VNQIFKDLAM
210 220 230 240 250
MIHDQGDLID SIEANVESSE VHVERATEQL QRAAYYQKKS RKKMCILVLV
260
LSVIVLILGL IIWLVYKTK
Length:269
Mass (Da):30,848
Last modified:July 27, 2011 - v1
Checksum:i81F42FC0468162FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACFV01120828 Genomic DNA No translation available.
ACFV01120829 Genomic DNA No translation available.
ACFV01120830 Genomic DNA No translation available.
ACFV01120831 Genomic DNA No translation available.
ACFV01120832 Genomic DNA No translation available.
ACFV01120833 Genomic DNA No translation available.
ACFV01120834 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSCJAT00000018197; ENSCJAP00000017205; ENSCJAG00000009378

Similar proteinsi

Entry informationi

Entry nameiF7I339_CALJA
AccessioniPrimary (citable) accession number: F7I339
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 25, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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