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F7HPV4

- F7HPV4_MACMU

UniProt

F7HPV4 - F7HPV4_MACMU

Protein
Submitted name:

Uncharacterized protein

Gene

POP4

Organism
Macaca mulatta (Rhesus macaque)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ribonuclease activity Source: InterPro
    2. RNA binding Source: InterPro

    GO - Biological processi

    1. mRNA cleavage Source: InterPro
    2. rRNA processing Source: InterPro
    3. tRNA processing Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:POP4Imported
    OrganismiMacaca mulatta (Rhesus macaque)Imported
    Taxonomic identifieri9544 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniCercopithecidaeCercopithecinaeMacaca
    ProteomesiUP000006718: Chromosome 19

    Subcellular locationi

    GO - Cellular componenti

    1. nucleolar ribonuclease P complex Source: InterPro
    2. ribonuclease MRP complex Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000010067.
    KOiK03538.
    OMAiMSQQACE.
    OrthoDBiEOG786H4B.
    TreeFamiTF313883.

    Family and domain databases

    Gene3Di2.30.30.210. 1 hit.
    InterProiIPR002730. RNase_P/MRP_p29.
    IPR016848. RNase_P/MRP_p29-subunit.
    IPR023534. Rof/RNase_P-like.
    [Graphical view]
    PfamiPF01868. UPF0086. 1 hit.
    [Graphical view]
    PIRSFiPIRSF027081. RNase_P/MRP_p29_subunit. 1 hit.
    SMARTiSM00538. POP4. 1 hit.
    [Graphical view]
    SUPFAMiSSF101744. SSF101744. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F7HPV4-1 [UniParc]FASTAAdd to Basket

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    MKSVIYHALS QKEAKDSDVQ PPGAQRAEAF VRAFLKRSTP GMSPQAREDQ    50
    LQRKAVVLEY FTRHKRKEKK KKKAKGLSAR QRRELRLFYI KPEQQRYSLF 100
    LPLHELWKQY IKDLCNGLKP DTQPQMIQAK LLKADLHGAI ISVTKSKCPS 150
    YVGITGILLQ ETKHIFKIIT KEDRLKVIPK LNCVFTVEID GFISYIYGSK 200
    FQLRSSERSA KKFKAKGTID L 221
    Length:221
    Mass (Da):25,537
    Last modified:July 27, 2011 - v1
    Checksum:iCFB765DF5EF3597B
    GO

    Sequence databases

    RefSeqiXP_001084400.1. XM_001084400.2.
    UniGeneiMmu.568.

    Genome annotation databases

    EnsembliENSMMUT00000024504; ENSMMUP00000022936; ENSMMUG00000017424.
    GeneIDi700209.
    KEGGimcc:700209.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_001084400.1. XM_001084400.2.
    UniGenei Mmu.568.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMMUT00000024504 ; ENSMMUP00000022936 ; ENSMMUG00000017424 .
    GeneIDi 700209.
    KEGGi mcc:700209.

    Organism-specific databases

    CTDi 10775.

    Phylogenomic databases

    GeneTreei ENSGT00390000010067.
    KOi K03538.
    OMAi MSQQACE.
    OrthoDBi EOG786H4B.
    TreeFami TF313883.

    Miscellaneous databases

    NextBioi 19986290.

    Family and domain databases

    Gene3Di 2.30.30.210. 1 hit.
    InterProi IPR002730. RNase_P/MRP_p29.
    IPR016848. RNase_P/MRP_p29-subunit.
    IPR023534. Rof/RNase_P-like.
    [Graphical view ]
    Pfami PF01868. UPF0086. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF027081. RNase_P/MRP_p29_subunit. 1 hit.
    SMARTi SM00538. POP4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF101744. SSF101744. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Evolutionary and biomedical insights from the rhesus macaque genome."
      Gibbs R.A., Rogers J., Katze M.G., Bumgarner R., Weinstock G.M., Mardis E.R., Remington K.A., Strausberg R.L., Venter J.C., Wilson R.K., Batzer M.A., Bustamante C.D., Eichler E.E., Hahn M.W., Hardison R.C., Makova K.D., Miller W., Milosavljevic A.
      , Palermo R.E., Siepel A., Sikela J.M., Attaway T., Bell S., Bernard K.E., Buhay C.J., Chandrabose M.N., Dao M., Davis C., Delehaunty K.D., Ding Y., Dinh H.H., Dugan-Rocha S., Fulton L.A., Gabisi R.A., Garner T.T., Godfrey J., Hawes A.C., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Kirkness E.F., Cree A., Fowler R.G., Lee S., Lewis L.R., Li Z., Liu Y.-S., Moore S.M., Muzny D., Nazareth L.V., Ngo D.N., Okwuonu G.O., Pai G., Parker D., Paul H.A., Pfannkoch C., Pohl C.S., Rogers Y.-H.C., Ruiz S.J., Sabo A., Santibanez J., Schneider B.W., Smith S.M., Sodergren E., Svatek A.F., Utterback T.R., Vattathil S., Warren W., White C.S., Chinwalla A.T., Feng Y., Halpern A.L., Hillier L.W., Huang X., Minx P., Nelson J.O., Pepin K.H., Qin X., Sutton G.G., Venter E., Walenz B.P., Wallis J.W., Worley K.C., Yang S.-P., Jones S.M., Marra M.A., Rocchi M., Schein J.E., Baertsch R., Clarke L., Csuros M., Glasscock J., Harris R.A., Havlak P., Jackson A.R., Jiang H., Liu Y., Messina D.N., Shen Y., Song H.X.-Z., Wylie T., Zhang L., Birney E., Han K., Konkel M.K., Lee J., Smit A.F.A., Ullmer B., Wang H., Xing J., Burhans R., Cheng Z., Karro J.E., Ma J., Raney B., She X., Cox M.J., Demuth J.P., Dumas L.J., Han S.-G., Hopkins J., Karimpour-Fard A., Kim Y.H., Pollack J.R., Vinar T., Addo-Quaye C., Degenhardt J., Denby A., Hubisz M.J., Indap A., Kosiol C., Lahn B.T., Lawson H.A., Marklein A., Nielsen R., Vallender E.J., Clark A.G., Ferguson B., Hernandez R.D., Hirani K., Kehrer-Sawatzki H., Kolb J., Patil S., Pu L.-L., Ren Y., Smith D.G., Wheeler D.A., Schenck I., Ball E.V., Chen R., Cooper D.N., Giardine B., Hsu F., Kent W.J., Lesk A., Nelson D.L., O'brien W.E., Pruefer K., Stenson P.D., Wallace J.C., Ke H., Liu X.-M., Wang P., Xiang A.P., Yang F., Barber G.P., Haussler D., Karolchik D., Kern A.D., Kuhn R.M., Smith K.E., Zwieg A.S.
      Science 316:222-234(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 17573Imported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: 17573Imported.

    Entry informationi

    Entry nameiF7HPV4_MACMU
    AccessioniPrimary (citable) accession number: F7HPV4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3