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F7GYU4 (F7GYU4_MACMU) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length511 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134 SAAS SAAS006589

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequences

Sequence LengthMass (Da)Tools
F7GYU4 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: D0B36F30C9D2DB73

FASTA51157,593
        10         20         30         40         50         60 
MKFFLLLLTI GFCWAQYSPN TQQGRTSIVH LFEWRWADIA LECERYLAPK GFGGVQVSPP 

        70         80         90        100        110        120 
NENVAIHNPS RPWWERYQPV SYKLCTRSGN EDEFRNMVTR CNNVGVRIYV DAVINHMCGN 

       130        140        150        160        170        180 
AVSAGTSSTC GSYFNPGSRD FPAVPYSGWD FNDGKCKTSS GDIENYNDAT QVRDCRLTGL 

       190        200        210        220        230        240 
LDLALEKDYV RSEIAEYMNK LIDMGVAGFR LDASKHMWPG DIKAILDKLH NLNSNWFPQG 

       250        260        270        280        290        300 
SKPFIYQEVI DLGGEPIKSS EYFGNGRVTE FKYGAKLGTV IRKWNGEKMS YLKNWGEGWG 

       310        320        330        340        350        360 
FVPSDRALVF VDNHDNQRGH GAGGASILTF WDARLYKMAV GFMLAHPYGF TRVMSSYRWP 

       370        380        390        400        410        420 
RNFQNGKDVN DWVGPPNNNG VIKEVTINPD TTCGNDWVCE HRWRQIRNMV AFRNVVDGQP 

       430        440        450        460        470        480 
FTNWYDNGSN QVAFGRGNKG FIVFNNDDWS FSSTLQTGLP AGTYCDVISG DKIDGNCTGI 

       490        500        510 
KIYVSNDGKA QFSISNSAED PFIAIHVESK L 

« Hide

References

« Hide 'large scale' references
[1]"Evolutionary and biomedical insights from the rhesus macaque genome."
Gibbs R.A., Rogers J., Katze M.G., Bumgarner R., Weinstock G.M., Mardis E.R., Remington K.A., Strausberg R.L., Venter J.C., Wilson R.K., Batzer M.A., Bustamante C.D., Eichler E.E., Hahn M.W., Hardison R.C., Makova K.D., Miller W., Milosavljevic A. expand/collapse author list , Palermo R.E., Siepel A., Sikela J.M., Attaway T., Bell S., Bernard K.E., Buhay C.J., Chandrabose M.N., Dao M., Davis C., Delehaunty K.D., Ding Y., Dinh H.H., Dugan-Rocha S., Fulton L.A., Gabisi R.A., Garner T.T., Godfrey J., Hawes A.C., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Kirkness E.F., Cree A., Fowler R.G., Lee S., Lewis L.R., Li Z., Liu Y.-S., Moore S.M., Muzny D., Nazareth L.V., Ngo D.N., Okwuonu G.O., Pai G., Parker D., Paul H.A., Pfannkoch C., Pohl C.S., Rogers Y.-H.C., Ruiz S.J., Sabo A., Santibanez J., Schneider B.W., Smith S.M., Sodergren E., Svatek A.F., Utterback T.R., Vattathil S., Warren W., White C.S., Chinwalla A.T., Feng Y., Halpern A.L., Hillier L.W., Huang X., Minx P., Nelson J.O., Pepin K.H., Qin X., Sutton G.G., Venter E., Walenz B.P., Wallis J.W., Worley K.C., Yang S.-P., Jones S.M., Marra M.A., Rocchi M., Schein J.E., Baertsch R., Clarke L., Csuros M., Glasscock J., Harris R.A., Havlak P., Jackson A.R., Jiang H., Liu Y., Messina D.N., Shen Y., Song H.X.-Z., Wylie T., Zhang L., Birney E., Han K., Konkel M.K., Lee J., Smit A.F.A., Ullmer B., Wang H., Xing J., Burhans R., Cheng Z., Karro J.E., Ma J., Raney B., She X., Cox M.J., Demuth J.P., Dumas L.J., Han S.-G., Hopkins J., Karimpour-Fard A., Kim Y.H., Pollack J.R., Vinar T., Addo-Quaye C., Degenhardt J., Denby A., Hubisz M.J., Indap A., Kosiol C., Lahn B.T., Lawson H.A., Marklein A., Nielsen R., Vallender E.J., Clark A.G., Ferguson B., Hernandez R.D., Hirani K., Kehrer-Sawatzki H., Kolb J., Patil S., Pu L.-L., Ren Y., Smith D.G., Wheeler D.A., Schenck I., Ball E.V., Chen R., Cooper D.N., Giardine B., Hsu F., Kent W.J., Lesk A., Nelson D.L., O'brien W.E., Pruefer K., Stenson P.D., Wallace J.C., Ke H., Liu X.-M., Wang P., Xiang A.P., Yang F., Barber G.P., Haussler D., Karolchik D., Kern A.D., Kuhn R.M., Smith K.E., Zwieg A.S.
Science 316:222-234(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 17573 Ensembl ENSMMUP00000039585 Ensembl ENSMMUP00000039581.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: 17573 Ensembl ENSMMUP00000039585 Ensembl ENSMMUP00000039581.
[3]"De novo assembly of the rhesus macaque transcriptome from NextGen mRNA sequences."
Pandey S., Maudhoo M.D., Guda C., Ferguson B., Fox H., Norgren R.B.
Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Brain EMBL AFJ70125.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
JV489091 mRNA. Translation: AFJ70125.1.
RefSeqNP_001253115.1. NM_001266186.1.
UniGeneMmu.21636.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMMUT00000046547; ENSMMUP00000039581; ENSMMUG00000031908.
ENSMMUT00000046551; ENSMMUP00000039585; ENSMMUG00000031908.
GeneID712893.
KEGGmcc:712893.

Organism-specific databases

CTD280.

Phylogenomic databases

GeneTreeENSGT00390000002882.
KOK01176.
OrthoDBEOG7RJPR2.
TreeFamTF312850.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Other

NextBio19962220.

Entry information

Entry nameF7GYU4_MACMU
AccessionPrimary (citable) accession number: F7GYU4
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: July 9, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)