Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Tetraspanin

Gene

CD9

Organism
Monodelphis domestica (Gray short-tailed opossum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
TetraspaninUniRule annotation
Gene namesi
Name:CD9Imported
OrganismiMonodelphis domestica (Gray short-tailed opossum)Imported
Taxonomic identifieri13616 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMetatheriaDidelphimorphiaDidelphidaeMonodelphis
Proteomesi
  • UP000002280 Componenti: Chromosome 8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 35HelicalUniRule annotationAdd BLAST24
Transmembranei55 – 81HelicalUniRule annotationAdd BLAST27
Transmembranei88 – 110HelicalUniRule annotationAdd BLAST23
Transmembranei194 – 220HelicalUniRule annotationAdd BLAST27

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMODG00000018053.

Interactioni

Protein-protein interaction databases

STRINGi13616.ENSMODP00000022507.

Family & Domainsi

Sequence similaritiesi

Belongs to the tetraspanin (TM4SF) family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3882. Eukaryota.
ENOG4111IRY. LUCA.
GeneTreeiENSGT00880000137858.
InParanoidiF7GEM3.
KOiK06460.
OMAiCCAIRKS.
OrthoDBiEOG091G0K9H.
TreeFamiTF352895.

Family and domain databases

Gene3Di1.10.1450.10. 1 hit.
InterProiView protein in InterPro
IPR000301. Tetraspanin.
IPR018499. Tetraspanin/Peripherin.
IPR018503. Tetraspanin_CS.
IPR008952. Tetraspanin_EC2_sf.
PfamiView protein in Pfam
PF00335. Tetraspannin. 1 hit.
PIRSFiPIRSF002419. Tetraspanin. 1 hit.
PRINTSiPR00259. TMFOUR.
SUPFAMiSSF48652. SSF48652. 1 hit.
PROSITEiView protein in PROSITE
PS00421. TM4_1. 1 hit.

Sequencei

Sequence statusi: Complete.

F7GEM3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVKGGTKCI KYLLFGFNFI FWLAGIAVLA IGLWLRFDTQ TKSIFDQEDN
60 70 80 90 100
NNSSFYTGVY ILIGAGALMM LVGFLGCCGA VQESQCMLGL FFAFLLVIFA
110 120 130 140 150
IEIAAAIWGY SHKEEVIREV QAFYKETYRK MKDKESPYKD TLKAIHQALD
160 170 180 190 200
CCGLTGAPEQ FILDICPNKD VISSFTVKPC PQAIEEIFNN KFHIIGAVGI
210 220
GIAVVMIFGM IFSMILCCAI RRNREMV
Length:227
Mass (Da):25,368
Last modified:July 27, 2011 - v1
Checksum:i7B210589D1355C68
GO

Sequence databases

RefSeqiXP_001364663.1. XM_001364626.4.

Genome annotation databases

EnsembliENSMODT00000022900; ENSMODP00000022507; ENSMODG00000018053.
GeneIDi100012793.
KEGGimdo:100012793.

Similar proteinsi

Entry informationi

Entry nameiF7GEM3_MONDO
AccessioniPrimary (citable) accession number: F7GEM3
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: November 22, 2017
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported