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Protein

Tetraspanin

Gene

CD9

Organism
Monodelphis domestica (Gray short-tailed opossum)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
TetraspaninUniRule annotation
Gene namesi
Name:CD9Imported
OrganismiMonodelphis domestica (Gray short-tailed opossum)Imported
Taxonomic identifieri13616 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMetatheriaDidelphimorphiaDidelphidaeMonodelphis
Proteomesi
  • UP000002280 Componenti: Chromosome 8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 35HelicalUniRule annotationAdd BLAST24
Transmembranei55 – 81HelicalUniRule annotationAdd BLAST27
Transmembranei88 – 110HelicalUniRule annotationAdd BLAST23
Transmembranei194 – 220HelicalUniRule annotationAdd BLAST27

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMODG00000018053

Interactioni

Protein-protein interaction databases

STRINGi13616.ENSMODP00000022507

Family & Domainsi

Sequence similaritiesi

Belongs to the tetraspanin (TM4SF) family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3882 Eukaryota
ENOG4111IRY LUCA
GeneTreeiENSGT00880000137858
InParanoidiF7GEM3
KOiK06460
OMAiEVFHNKF
OrthoDBiEOG091G0K9H
TreeFamiTF352895

Family and domain databases

Gene3Di1.10.1450.10, 1 hit
InterProiView protein in InterPro
IPR000301 Tetraspanin
IPR018499 Tetraspanin/Peripherin
IPR018503 Tetraspanin_CS
IPR008952 Tetraspanin_EC2_sf
PfamiView protein in Pfam
PF00335 Tetraspannin, 1 hit
PIRSFiPIRSF002419 Tetraspanin, 1 hit
PRINTSiPR00259 TMFOUR
SUPFAMiSSF48652 SSF48652, 1 hit
PROSITEiView protein in PROSITE
PS00421 TM4_1, 1 hit

Sequencei

Sequence statusi: Complete.

F7GEM3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVKGGTKCI KYLLFGFNFI FWLAGIAVLA IGLWLRFDTQ TKSIFDQEDN
60 70 80 90 100
NNSSFYTGVY ILIGAGALMM LVGFLGCCGA VQESQCMLGL FFAFLLVIFA
110 120 130 140 150
IEIAAAIWGY SHKEEVIREV QAFYKETYRK MKDKESPYKD TLKAIHQALD
160 170 180 190 200
CCGLTGAPEQ FILDICPNKD VISSFTVKPC PQAIEEIFNN KFHIIGAVGI
210 220
GIAVVMIFGM IFSMILCCAI RRNREMV
Length:227
Mass (Da):25,368
Last modified:July 27, 2011 - v1
Checksum:i7B210589D1355C68
GO

Sequence databases

RefSeqiXP_001364663.1, XM_001364626.4

Genome annotation databases

EnsembliENSMODT00000022900; ENSMODP00000022507; ENSMODG00000018053
GeneIDi100012793
KEGGimdo:100012793

Similar proteinsi

Entry informationi

Entry nameiF7GEM3_MONDO
AccessioniPrimary (citable) accession number: F7GEM3
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: March 28, 2018
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health