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Protein
Submitted name:

Nucleoporin 50

Gene

NUP50

Organism
Ornithorhynchus anatinus (Duckbill platypus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleoporin 50Imported
Gene namesi
Name:NUP50Imported
OrganismiOrnithorhynchus anatinus (Duckbill platypus)Imported
Taxonomic identifieri9258 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMonotremataOrnithorhynchidaeOrnithorhynchus
Proteomesi
  • UP000002279 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSOANG00000015792.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9258.ENSOANP00000024896.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini348 – 471RanBD1InterPro annotationAdd BLAST124

Phylogenomic databases

eggNOGiKOG2724. Eukaryota.
ENOG410YPHB. LUCA.
GeneTreeiENSGT00440000035348.
InParanoidiF7FXH4.
KOiK14295.
OrthoDBiEOG091G0HML.
TreeFamiTF106504.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiView protein in InterPro
IPR015007. NUP2/50/61.
IPR011993. PH-like_dom_sf.
IPR000156. Ran_bind_dom.
PfamiView protein in Pfam
PF08911. NUP50. 1 hit.
PF00638. Ran_BP1. 1 hit.
SMARTiView protein in SMART
SM00160. RanBD. 1 hit.
SUPFAMiSSF50729. SSF50729. 1 hit.

Sequencei

Sequence statusi: Complete.

F7FXH4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKRNAEKEL TDRNWDQEEE VEEVGTFSVA SEEVLKNRAI KKAKRRNVGF
60 70 80 90 100
ESESGGAFKG FKGLVASGGG GFGGFGNGTG GKPLEGLSNG GSGIGGSSAL
110 120 130 140 150
SGPPSFANLK AAPEAKASSF GSGPANGPGP TTSPVEKKAS GSKTNSDGQG
160 170 180 190 200
AAATAGGSGG SGSGRACGAS AYHKQLAALN CSVRDWIVKH VNTNPLCDLT
210 220 230 240 250
PVFKDYAKYL AGIEQQPGGS SDSGSESEGS RKPSGPPPPP GSARPQQGSA
260 270 280 290 300
FLFHGSKTDG PADTGAEKKE EPVAGSFHFG KKVDSSALGA LGSGPLPSFS
310 320 330 340 350
FSPGGSGLFG KDAGQGKPAS TPFSASSQEG RPEGAGSDRA GGDEEESEEP
360 370 380 390 400
PTVIVNEVRE EDAFYSKKCK LFYKKDNEYK EKGVGTLHLK PAGKQKTQLL
410 420 430 440 450
VRADTNLGNI LLNVLIPPKM PCTRTGKNNV LIVCVPNPPI DEKNATVPVP
460 470
MLIRVKTSKD ADELHKILLE KKEA
Length:474
Mass (Da):48,801
Last modified:January 9, 2013 - v2
Checksum:iC33FA81096987DBF
GO

Sequence databases

RefSeqiXP_001505805.1. XM_001505755.3.

Genome annotation databases

EnsembliENSOANT00000024900; ENSOANP00000024896; ENSOANG00000015792.
GeneIDi100080095.
KEGGioaa:100080095.

Similar proteinsi

Entry informationi

Entry nameiF7FXH4_ORNAN
AccessioniPrimary (citable) accession number: F7FXH4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: January 9, 2013
Last modified: November 22, 2017
This is version 43 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported