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F7FJT1 (F7FJT1_MACMU) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length818 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMMUP00000016350

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3781 By similarity PIRSR PIRSR000459-1
Active site4371 By similarity PIRSR PIRSR000459-1
Active site4601 By similarity PIRSR PIRSR000459-1
Metal binding5001Calcium By similarity
Metal binding5021Calcium By similarity
Metal binding5491Calcium By similarity
Metal binding5541Calcium By similarity

Sequences

Sequence LengthMass (Da)Tools
F7FJT1 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 48D46D43F21A2B27

FASTA81890,002
        10         20         30         40         50         60 
MMDGPRSDVG RWGGNPLQPP TTPSPEPEPE PDRRFRRGGG GRSFWARCCG CCSCRNVADD 

        70         80         90        100        110        120 
DWGPEPSDSR GRGSSSGTRR PGSRGSDSRQ PVSRGSGVNA AGDGTIREGM LVVTGVDLLS 

       130        140        150        160        170        180 
SRSDQNRQEH HTDEYEYDEL IVRRGQPFRM LLLLSRTYES SDRITLELLI GNNPEVGKGT 

       190        200        210        220        230        240 
HVIIPVGKGG SGGWKAQVTK ASGQTLNLRV HTSPNAIIGK FQFTVRTQSD AGEFQLPFDA 

       250        260        270        280        290        300 
RNEIYILFNP WCPEDIVYVD HEDWRQEYVL NESGRIYYGT EAQIGERTWN YGQFDHGVLD 

       310        320        330        340        350        360 
ACLYILDRRG MPYGGRGDPV SVSRVISAMV NSLDDNGVLI GNWSGDYSRG TNPSAWVGSV 

       370        380        390        400        410        420 
EILLSYLRTG YSVPYGQCWV FAGVTTTVLR CLGLATRTVT NFNSAHDTDT SLTMDIYFDE 

       430        440        450        460        470        480 
NMKPLEHLNH DSVWNFHVWN DCWMKRPDLP SGFDGWQVVD ATPQETSSGI FCCGPCSVES 

       490        500        510        520        530        540 
IKNGLVYMKY DTPFIFAEVN SDKVYWQRQD DGSFKIVYVE EKAIGTLIVT KAIGSNMRED 

       550        560        570        580        590        600 
ITYLYKHPEG SDAERKAVET AAAHGSKPNV YANRGSAEDV AMQVEAQDAV MGQDLMVSVM 

       610        620        630        640        650        660 
LTNHSSSRRT VKLHLYLSVT FYTGVTGTIF KETKKEVELA PGASDRVTMP VAYKEYRPHL 

       670        680        690        700        710        720 
VDQGAMLLNV SGHVKESGQV LAKQHTFRLR TPDLSLTLLG AAVVGQECEV QIVFKNPLPV 

       730        740        750        760        770        780 
TLTNVVFRLE GSGLQRPKIL NVGDIGGNET VTLRQTFVPV RPGPRQLIAS LDSPQLSQVH 

       790        800        810 
GVIQVDVAPA PGDRGFFSDA GGDSHLGETI PMASRGGA 

« Hide

References

« Hide 'large scale' references
[1]"Evolutionary and biomedical insights from the rhesus macaque genome."
Gibbs R.A., Rogers J., Katze M.G., Bumgarner R., Weinstock G.M., Mardis E.R., Remington K.A., Strausberg R.L., Venter J.C., Wilson R.K., Batzer M.A., Bustamante C.D., Eichler E.E., Hahn M.W., Hardison R.C., Makova K.D., Miller W., Milosavljevic A. expand/collapse author list , Palermo R.E., Siepel A., Sikela J.M., Attaway T., Bell S., Bernard K.E., Buhay C.J., Chandrabose M.N., Dao M., Davis C., Delehaunty K.D., Ding Y., Dinh H.H., Dugan-Rocha S., Fulton L.A., Gabisi R.A., Garner T.T., Godfrey J., Hawes A.C., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Kirkness E.F., Cree A., Fowler R.G., Lee S., Lewis L.R., Li Z., Liu Y.-S., Moore S.M., Muzny D., Nazareth L.V., Ngo D.N., Okwuonu G.O., Pai G., Parker D., Paul H.A., Pfannkoch C., Pohl C.S., Rogers Y.-H.C., Ruiz S.J., Sabo A., Santibanez J., Schneider B.W., Smith S.M., Sodergren E., Svatek A.F., Utterback T.R., Vattathil S., Warren W., White C.S., Chinwalla A.T., Feng Y., Halpern A.L., Hillier L.W., Huang X., Minx P., Nelson J.O., Pepin K.H., Qin X., Sutton G.G., Venter E., Walenz B.P., Wallis J.W., Worley K.C., Yang S.-P., Jones S.M., Marra M.A., Rocchi M., Schein J.E., Baertsch R., Clarke L., Csuros M., Glasscock J., Harris R.A., Havlak P., Jackson A.R., Jiang H., Liu Y., Messina D.N., Shen Y., Song H.X.-Z., Wylie T., Zhang L., Birney E., Han K., Konkel M.K., Lee J., Smit A.F.A., Ullmer B., Wang H., Xing J., Burhans R., Cheng Z., Karro J.E., Ma J., Raney B., She X., Cox M.J., Demuth J.P., Dumas L.J., Han S.-G., Hopkins J., Karimpour-Fard A., Kim Y.H., Pollack J.R., Vinar T., Addo-Quaye C., Degenhardt J., Denby A., Hubisz M.J., Indap A., Kosiol C., Lahn B.T., Lawson H.A., Marklein A., Nielsen R., Vallender E.J., Clark A.G., Ferguson B., Hernandez R.D., Hirani K., Kehrer-Sawatzki H., Kolb J., Patil S., Pu L.-L., Ren Y., Smith D.G., Wheeler D.A., Schenck I., Ball E.V., Chen R., Cooper D.N., Giardine B., Hsu F., Kent W.J., Lesk A., Nelson D.L., O'brien W.E., Pruefer K., Stenson P.D., Wallace J.C., Ke H., Liu X.-M., Wang P., Xiang A.P., Yang F., Barber G.P., Haussler D., Karolchik D., Kern A.D., Kuhn R.M., Smith K.E., Zwieg A.S.
Science 316:222-234(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 17573 Ensembl ENSMMUP00000016350.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: 17573 Ensembl ENSMMUP00000016350.

Cross-references

Sequence databases

RefSeqXP_001113577.1. XM_001113577.1.
XP_002805041.1. XM_002804995.1.
UniGeneMmu.27927.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMMUT00000017459; ENSMMUP00000016350; ENSMMUG00000012452.
GeneID715854.
KEGGmcc:715854.

Organism-specific databases

CTD7051.

Phylogenomic databases

GeneTreeENSGT00740000115156.
KOK05619.
OMAGRWGGNP.
OrthoDBEOG7WT40M.
TreeFamTF324278.

Family and domain databases

Gene3D2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERPTHR11590. PTHR11590. 1 hit.
PfamPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFPIRSF000459. TGM_EBP42. 1 hit.
SMARTSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio19963173.

Entry information

Entry nameF7FJT1_MACMU
AccessionPrimary (citable) accession number: F7FJT1
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: February 19, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)