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Protein
Submitted name:

Activating transcription factor 1

Gene

Atf1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • cellular protein complex assembly Source: RGD
  • positive regulation of DNA replication Source: RGD
  • positive regulation of neuron projection development Source: RGD
  • positive regulation of transcription from RNA polymerase II promoter Source: RGD
  • response to cobalt ion Source: RGD
  • response to organic cyclic compound Source: RGD

Enzyme and pathway databases

ReactomeiR-RNO-199920. CREB phosphorylation.

Names & Taxonomyi

Protein namesi
Submitted name:
Activating transcription factor 1Imported
Gene namesi
Name:Atf1Imported
ORF Names:rCG_50522Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi1307360. Atf1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000061088.

Interactioni

GO - Molecular functioni

  • identical protein binding Source: Ensembl
  • protein complex binding Source: RGD
  • protein heterodimerization activity Source: RGD

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000052256.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 89KIDInterPro annotationAdd BLAST60
Domaini210 – 261BZIPInterPro annotationAdd BLAST52

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili228 – 262Sequence analysisAdd BLAST35

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG3584. Eukaryota.
ENOG410ZZJZ. LUCA.
GeneTreeiENSGT00390000008655.
KOiK09053.
OMAiHIAQQMS.
OrthoDBiEOG091G0FTJ.

Family and domain databases

Gene3Di1.10.880.10. 1 hit.
InterProiView protein in InterPro
IPR029825. ATF1.
IPR004827. bZIP.
IPR003102. Coactivator_CBP_pKID.
IPR001630. Leuzip_CREB.
IPR008917. TF_DNA-bd_sf.
PANTHERiPTHR22952:SF258. PTHR22952:SF258. 1 hit.
PfamiView protein in Pfam
PF00170. bZIP_1. 1 hit.
PF02173. pKID. 1 hit.
PRINTSiPR00041. LEUZIPPRCREB.
SMARTiView protein in SMART
SM00338. BRLZ. 1 hit.
PROSITEiView protein in PROSITE
PS50217. BZIP. 1 hit.
PS00036. BZIP_BASIC. 1 hit.
PS50953. KID. 1 hit.

Sequencei

Sequence statusi: Complete.

F7FD47-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDSHKSNTS ETASQPGSTV PGIISQIVHQ VSSLSESEES QDSSDSIGSS
60 70 80 90 100
QKAHGILARR PSYRKILKDL SSEDTRGRKG DGENPSISAV TSMSVPTPIY
110 120 130 140 150
QTSSGQYIAI APNGALQLAS PGPDGVQALQ TLTMTNSSSA QQGAILQYAQ
160 170 180 190 200
TSDGQQILVP SNQVVVQTAS GDMQTYQIRT TPSATSLPQT MVMTSPVTLT
210 220 230 240 250
SQTTKTDDPQ LKREIRLMKN REAARECRRK KKEYVKCLEN RVAVLENQNK
260
TLIEELKTLK DLYSHKSV
Length:268
Mass (Da):29,085
Last modified:April 3, 2013 - v1
Checksum:iBB93367B86C63177
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07058893 Genomic DNA. No translation available.
AABR07058894 Genomic DNA. No translation available.
CH474035 Genomic DNA. Translation: EDL86959.1.
RefSeqiNP_001094365.1. NM_001100895.1.
UniGeneiRn.105304.

Genome annotation databases

EnsembliENSRNOT00000079011; ENSRNOP00000073249; ENSRNOG00000061088.
ENSRNOT00000087298; ENSRNOP00000073278; ENSRNOG00000061088.
GeneIDi315305.
KEGGirno:315305.

Similar proteinsi

Entry informationi

Entry nameiF7FD47_RAT
AccessioniPrimary (citable) accession number: F7FD47
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2013
Last sequence update: April 3, 2013
Last modified: November 22, 2017
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported