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Protein
Submitted name:

Lysine demethylase 4A

Gene

KDM4A

Organism
Macaca mulatta (Rhesus macaque)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Lysine demethylase 4AImported
Gene namesi
Name:KDM4AImported
OrganismiMacaca mulatta (Rhesus macaque)Imported
Taxonomic identifieri9544 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniCercopithecidaeCercopithecinaeMacaca
Proteomesi
  • UP000006718 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Expressioni

Gene expression databases

BgeeiENSMMUG00000012479.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9544.ENSMMUP00000016387.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 56JmjNInterPro annotationAdd BLAST43
Domaini142 – 308JmjCInterPro annotationAdd BLAST167
Domaini758 – 871PHD-typeInterPro annotationAdd BLAST114

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili462 – 489Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerSAAS annotation

Phylogenomic databases

eggNOGiENOG410IT40. Eukaryota.
COG5141. LUCA.
GeneTreeiENSGT00530000063342.
InParanoidiF7FB62.
OrthoDBiEOG091G01FR.
TreeFamiTF106449.

Family and domain databases

Gene3Di3.30.40.10. 3 hits.
InterProiView protein in InterPro
IPR034732. EPHD.
IPR003347. JmjC_dom.
IPR003349. JmjN.
IPR002999. Tudor.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF02373. JmjC. 1 hit.
PF02375. JmjN. 1 hit.
SMARTiView protein in SMART
SM00558. JmjC. 1 hit.
SM00545. JmjN. 1 hit.
SM00249. PHD. 2 hits.
SM00333. TUDOR. 2 hits.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS51805. EPHD. 1 hit.
PS51184. JMJC. 1 hit.
PS51183. JMJN. 1 hit.

Sequencei

Sequence statusi: Complete.

F7FB62-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASESETLNP SARIMTFYPT MEEFRNFSRY IAYIESQGAH RAGLAKVVPP
60 70 80 90 100
KEWKPRASYD DIDDLVIPAP IQQLVTGQSG LFTQYNIQKK AMTVREFRKI
110 120 130 140 150
ANSDKYCTPR YSEFEELERK YWKNLTFNPP IYGADVNGTL YEKHVDEWNI
160 170 180 190 200
GRLRTILDLV EKESGITIEG VNTPYLYFGM WKTSFAWHTE DMDLYSINYL
210 220 230 240 250
HFGEPKSWYS VPPEHGKRLE RLAKGFFPGS AQSCEAFLRH KMTLISPLML
260 270 280 290 300
KKYGIPFDKV TQEAGEFMIT FPYGYHAGFN HGFNCAESTN FATRRWIEYG
310 320 330 340 350
KQAVLCSCRK DMVKISMDVF VRKFQPERYK LWKAGKDNTV IDHTLPTPEA
360 370 380 390 400
AEFLMESELP PRAGNEEECP EEDMEGVEDG EEGDLKTSLA KHRIGTKRHR
410 420 430 440 450
VCLEIPQEVS QSELFPKEEL SSEQYEMTEC PAALAPVRPT HSSVRQVEDG
460 470 480 490 500
LTFPDYSDST EVKFEELKNV KLEEEDEEEE QEAAALDLSV NPASVGGRLV
510 520 530 540 550
FSGSQKKSSS LGSGSSRDSV SSDSETSEPL SCRAQGQTGV LTVHSYAKGD
560 570 580 590 600
GRVTVGEPCM RKKGSAARSI SERELAEVWA PGSGIRSQGR VSLSKLPRHP
610 620 630 640 650
TCAVRTSEQL TPEEEAEETE AWAKPLSQLW QNRPPNFEAE KEFNETMAQQ
660 670 680 690 700
APHCAVCMIF QTYHQVEFGG FTQNCGNASD LAPQKQRTKP LIPEMCFTST
710 720 730 740 750
GCSTDINLST PYLEEDGTSI LVSCKKCSVR VHASCYGVPP AKASEDWMCS
760 770 780 790 800
RCSANALEED CCLCSLRGGA LQRANDDRWV HVSCAVAILE ARFVNIAERS
810 820 830 840 850
PVDVSKIPLP RFKLKCIFCK KRRKRTAGCC VQCSHGRCPT AFHVSCAQAA
860 870 880 890 900
GVMMQPDDWP FVVFITCFRH KIPNLERAKG ALQSITAGQK VISKHKNGRF
910 920 930 940 950
YQCEVVRLTT ETFYEVNFDD GSFSDNLYPE DIVSQDCLQL GPPAEGEVVQ
960 970 980 990 1000
VRWTDGQVYG AKFVASHPIQ MYQVEFEDGS QLVVKRDDVY TLDEELPKRV
1010 1020 1030 1040 1050
KSRLSVASDM RFNEIFTEKE VKQEKKRQRV INSRYREDYI EPALYRAIME
Length:1,050
Mass (Da):118,791
Last modified:November 30, 2016 - v2
Checksum:iA53CCD6F0BBFA204
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JSUE03001242 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMMUT00000017497; ENSMMUP00000016387; ENSMMUG00000012479.

Similar proteinsi

Entry informationi

Entry nameiF7FB62_MACMU
AccessioniPrimary (citable) accession number: F7FB62
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: November 30, 2016
Last modified: August 30, 2017
This is version 42 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported