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Protein
Submitted name:

Zinc finger protein, FOG family member 1

Gene

zfpm1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-XTR-983231. Factors involved in megakaryocyte development and platelet production.

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein, FOG family member 1Imported
Gene namesi
Name:zfpm1Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-940294. zfpm1.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

PaxDbiF7ERZ9.

Expressioni

Gene expression databases

BgeeiENSXETG00000023988.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000051748.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini354 – 377C2H2-typeInterPro annotationAdd BLAST24
Domaini626 – 659CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini741 – 774CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini877 – 910CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini1143 – 1176CCHC FOG-typeInterPro annotationAdd BLAST34

Sequence similaritiesi

Belongs to the FOG (Friend of GATA) family.PROSITE-ProRule annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00530000063823.
InParanoidiF7ERZ9.
OMAiGDLMEHF.
OrthoDBiEOG091G00RC.
TreeFamiTF331342.

Family and domain databases

InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 8 hits.
SUPFAMiSSF57667. SSF57667. 5 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 4 hits.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.

Sequencei

Sequence statusi: Complete.

F7ERZ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
SSLGKQANGS SFEGSLGDME DTEDKLIDES NCSDKDGASS DQDGSVDCGS
60 70 80 90 100
SSPANSDSNE GNRCNSVTQS LDQETEDVAS KPSLDELGQV LTSPCPSVEG
110 120 130 140 150
ELAENEENTP VPRSPSSTKD VEEPQIWNGP DELELEISST DGVGHIRARS
160 170 180 190 200
QLHKGFSWGP YKGNFTGSSS SPGPTDLNVS LSLDVEGDCW LKYVTLVSCE
210 220 230 240 250
AEANAVLYRK GKKYTHGNCC LSFRQLYWPV IIQFRVCNYV TKTLTFLGKK
260 270 280 290 300
GPSXSLISIS QQKPCLPSFP FISILLLPSS STALMFKIEV HCSSAQDNSA
310 320 330 340 350
HKSCAPEVTH CACVMPRAWN RRAMLEEPAS LTCSFLHNTQ IHLFKVSHSG
360 370 380 390 400
ERPFVCLICL SAFTTKANCE RHLKVHTDTL NGVCHGCGFI STTRDILYSH
410 420 430 440 450
LVTNHMVCQP GSKVDVYPVV KAVAAVKSAN PAVSQIASSS LLKCGLCGFL
460 470 480 490 500
ADGLPSLQQH ALLHTTNSSP AATHSVKSPA ENQKEKQNLE GQENGNAKSP
510 520 530 540 550
ISSSSSGSEE APLKLNIKEE PEMQHSISEA GSTICEAKDG VALVQSPAIK
560 570 580 590 600
VKTEMSSPTP GSSPVPNETA AATGGGTVII PHYVFGHEAT AAIVPQASEI
610 620 630 640 650
LAKMSELVHS RLKQGQAVTP AGFSGSSAPK GATCFECEIT FNNINNYYVH
660 670 680 690 700
KRLYCSGRHV LDESSSAVRK VKASPARTSL ASGFSSSEQE ASPPQEDAGG
710 720 730 740 750
ESSTPVVAVK IEESSGMDCE GTGSGHVSEG SQSPSSLDDP DEDPTRTVCE
760 770 780 790 800
ACNIRFSRHD TYVVHKRYYC ASRHDPPLRR SGVNKTGPPY ATQPTPRTRK
810 820 830 840 850
RRKLYEIHGV VPSESTPPQP HPLGRVEAMA LMPGLIPAPA VPSPSSSPDA
860 870 880 890 900
ADGPIDLSKK PRLVTEAPVP SPVATVAPLA DYHECTACRI SFNSLESYLA
910 920 930 940 950
HKKFSCPTAP LQQKALHQLQ KVKSPSSATG KLVDDTVKVK VKVESRASMS
960 970 980 990 1000
PGSVSETTQP LALQLSAISD PKQLKHISSV TETSPPATTT CPYCPHNVII
1010 1020 1030 1040 1050
RGDLLEHFRS VHGLLLAKPT AGHRLQTTFM EVLVPARGQT SSASENSLPS
1060 1070 1080 1090 1100
PPVPSASPLQ LPGLRRENSN YKDTTSSSSS SANGSPVLTS TPRPIMPTSP
1110 1120 1130 1140 1150
ALPLNSVPMA ESRREDALRV PSQVLLPGDK AMQPPKTGLT SQVPNGNHRY
1160 1170 1180
CRLCNIKFSS LSTFIAHKKY YCSSHAAEHV K
Length:1,181
Mass (Da):126,175
Last modified:July 27, 2011 - v1
Checksum:i7AB5917DCEAB6E94
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01053667 Genomic DNA. No translation available.
AAMC01053668 Genomic DNA. No translation available.
AAMC01053669 Genomic DNA. No translation available.
AAMC01053670 Genomic DNA. No translation available.
AAMC01053671 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSXETT00000051748; ENSXETP00000051748; ENSXETG00000023988.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01053667 Genomic DNA. No translation available.
AAMC01053668 Genomic DNA. No translation available.
AAMC01053669 Genomic DNA. No translation available.
AAMC01053670 Genomic DNA. No translation available.
AAMC01053671 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000051748.

Proteomic databases

PaxDbiF7ERZ9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSXETT00000051748; ENSXETP00000051748; ENSXETG00000023988.

Organism-specific databases

XenbaseiXB-GENE-940294. zfpm1.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00530000063823.
InParanoidiF7ERZ9.
OMAiGDLMEHF.
OrthoDBiEOG091G00RC.
TreeFamiTF331342.

Enzyme and pathway databases

ReactomeiR-XTR-983231. Factors involved in megakaryocyte development and platelet production.

Gene expression databases

BgeeiENSXETG00000023988.

Family and domain databases

InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 8 hits.
SUPFAMiSSF57667. SSF57667. 5 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 4 hits.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiF7ERZ9_XENTR
AccessioniPrimary (citable) accession number: F7ERZ9
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 10, 2017
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.