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F7D6D1

- F7D6D1_MOUSE

UniProt

F7D6D1 - F7D6D1_MOUSE

Protein
Submitted name:

Short transient receptor potential channel 2

Gene

Trpc2

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 5 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calmodulin binding Source: MGI
    2. damaged DNA binding Source: InterPro
    3. diacylglycerol binding Source: MGI
    4. protein binding Source: MGI
    5. store-operated calcium channel activity Source: MGI

    GO - Biological processi

    1. acrosome reaction Source: MGI
    2. calcium ion transmembrane transport Source: GOC
    3. calcium ion transport Source: MGI
    4. female courtship behavior Source: MGI
    5. inter-male aggressive behavior Source: MGI
    6. mating behavior, sex discrimination Source: MGI
    7. negative regulation of male mating behavior Source: MGI
    8. positive regulation of cytosolic calcium ion concentration Source: MGI
    9. regulation of gene expression Source: MGI
    10. response to pheromone Source: MGI
    11. single strand break repair Source: InterPro
    12. territorial aggressive behavior Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Short transient receptor potential channel 2Imported
    Gene namesi
    Name:Trpc2Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 7

    Organism-specific databases

    MGIiMGI:109527. Trpc2.

    Subcellular locationi

    GO - Cellular componenti

    1. dendrite membrane Source: MGI
    2. endomembrane system Source: MGI
    3. endoplasmic reticulum membrane Source: MGI
    4. Golgi membrane Source: MGI
    5. nuclear envelope Source: MGI
    6. plasma membrane Source: MGI

    Expressioni

    Gene expression databases

    BgeeiF7D6D1.

    Structurei

    3D structure databases

    ProteinModelPortaliF7D6D1.
    SMRiF7D6D1. Positions 1-63.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00680000099764.

    Family and domain databases

    Gene3Di2.60.120.260. 1 hit.
    InterProiIPR008979. Galactose-bd-like.
    IPR002706. Xrcc1_N.
    [Graphical view]
    PfamiPF01834. XRCC1_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF49785. SSF49785. 1 hit.

    Sequencei

    Sequence statusi: Fragment.

    F7D6D1-1 [UniParc]FASTAAdd to Basket

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    ATMLMSRTDS KSGKNRSGVR MFKDGDFLTP ASGESWDRLR LTCSQPFTRH    50
    QSFGLAFLRV RSSLGSLADP VVDPSAPGSS GLNQNSTDVL ESDPRPWLTN 100
    PSIRRTFFPD PQTYVPAVDI SQGQGHIAHG HKNPSRGPLE HQGNFRAQGY 150
    VEAVAARASG AGSPHGAFCC P 171
    Length:171
    Mass (Da):18,393
    Last modified:July 27, 2011 - v1
    Checksum:i576D945BCD9FA99A
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC132297 Genomic DNA. No translation available.
    AC150275 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSMUST00000139104; ENSMUSP00000122430; ENSMUSG00000070425.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC132297 Genomic DNA. No translation available.
    AC150275 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali F7D6D1.
    SMRi F7D6D1. Positions 1-63.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000139104 ; ENSMUSP00000122430 ; ENSMUSG00000070425 .

    Organism-specific databases

    MGIi MGI:109527. Trpc2.

    Phylogenomic databases

    GeneTreei ENSGT00680000099764.

    Miscellaneous databases

    NextBioi 35559623.
    SOURCEi Search...

    Gene expression databases

    Bgeei F7D6D1.

    Family and domain databases

    Gene3Di 2.60.120.260. 1 hit.
    InterProi IPR008979. Galactose-bd-like.
    IPR002706. Xrcc1_N.
    [Graphical view ]
    Pfami PF01834. XRCC1_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49785. SSF49785. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    2. Ensembl
      Submitted (JUN-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiF7D6D1_MOUSE
    AccessioniPrimary (citable) accession number: F7D6D1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3