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F7D6D1 (F7D6D1_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Trpc2 Ensembl ENSMUSP00000122430 MGI 109527
OrganismMus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000122430
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length171 AA.
Sequence statusFragment.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000122430

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processacrosome reaction

Inferred from mutant phenotype PubMed 11331878. Source: MGI

calcium ion transmembrane transport

Inferred from direct assay PubMed 10051594. Source: GOC

calcium ion transport

Inferred from mutant phenotype PubMed 11331878. Source: MGI

female courtship behavior

Inferred from mutant phenotype PubMed 17676034. Source: MGI

inter-male aggressive behavior

Inferred from mutant phenotype PubMed 11823606. Source: MGI

mating behavior, sex discrimination

Inferred from mutant phenotype PubMed 11823606PubMed 11972034. Source: MGI

negative regulation of male mating behavior

Inferred from genetic interaction PubMed 24089208. Source: MGI

positive regulation of cytosolic calcium ion concentration

Inferred from physical interaction PubMed 10051594. Source: MGI

response to pheromone

Inferred from mutant phenotype PubMed 11823606PubMed 11972034PubMed 24089208. Source: MGI

single strand break repair

Inferred from electronic annotation. Source: InterPro

territorial aggressive behavior

Inferred from mutant phenotype PubMed 11972034PubMed 17676034. Source: MGI

   Cellular_componentGolgi membrane

Inferred from direct assay PubMed 10998353. Source: MGI

dendrite membrane

Inferred from mutant phenotype PubMed 14642279. Source: MGI

endomembrane system

Inferred from direct assay PubMed 10998353. Source: MGI

endoplasmic reticulum membrane

Inferred from direct assay PubMed 10998353. Source: MGI

nuclear envelope

Inferred from direct assay PubMed 10998353. Source: MGI

plasma membrane

Inferred from direct assay PubMed 14699131. Source: MGI

   Molecular_functioncalmodulin binding

Inferred from direct assay PubMed 12601176. Source: MGI

damaged DNA binding

Inferred from electronic annotation. Source: InterPro

diacylglycerol binding

Inferred from mutant phenotype PubMed 14642279. Source: MGI

store-operated calcium channel activity

Inferred from direct assay PubMed 10051594. Source: MGI

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 Ensembl ENSMUSP00000122430

Sequences

Sequence LengthMass (Da)Tools
F7D6D1 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 576D945BCD9FA99A

FASTA17118,393
        10         20         30         40         50         60 
ATMLMSRTDS KSGKNRSGVR MFKDGDFLTP ASGESWDRLR LTCSQPFTRH QSFGLAFLRV 

        70         80         90        100        110        120 
RSSLGSLADP VVDPSAPGSS GLNQNSTDVL ESDPRPWLTN PSIRRTFFPD PQTYVPAVDI 

       130        140        150        160        170 
SQGQGHIAHG HKNPSRGPLE HQGNFRAQGY VEAVAARASG AGSPHGAFCC P 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC132297 Genomic DNA. No translation available.
AC150275 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalF7D6D1.
SMRF7D6D1. Positions 1-63.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000139104; ENSMUSP00000122430; ENSMUSG00000070425.

Organism-specific databases

MGIMGI:109527. Trpc2.

Phylogenomic databases

GeneTreeENSGT00680000099764.

Gene expression databases

BgeeF7D6D1.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
InterProIPR008979. Galactose-bd-like.
IPR002706. Xrcc1_N.
[Graphical view]
PfamPF01834. XRCC1_N. 1 hit.
[Graphical view]
SUPFAMSSF49785. SSF49785. 1 hit.
ProtoNetSearch...

Other

NextBio35559623.
SOURCESearch...

Entry information

Entry nameF7D6D1_MOUSE
AccessionPrimary (citable) accession number: F7D6D1
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)