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Protein
Submitted name:

Uncharacterized protein

Gene

sftpa

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:sftpaImported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
ProteomesiUP000008143 Componenti: Unplaced

Organism-specific databases

XenbaseiXB-GENE-6065158. sftpa.

Expressioni

Gene expression databases

BgeeiF7D669.

Structurei

3D structure databases

ProteinModelPortaliF7D669.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00700000104102.
InParanoidiF7D669.
OMAiQYNRYAY.
OrthoDBiEOG7HXCVB.
TreeFamiTF330481.

Family and domain databases

Gene3Di3.10.100.10. 1 hit.
InterProiIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR018378. C-type_lectin_CS.
IPR016187. C-type_lectin_fold.
[Graphical view]
PfamiPF00059. Lectin_C. 1 hit.
[Graphical view]
SMARTiSM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 1 hit.
PROSITEiPS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

F7D669-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
EAVWISNRIS ILGSLDHDLH IQIFDLTHHI SSIVGALRLE GKIQAAGGKI
60 70 80 90 100
FASSGTELDF EASLAACKAV GGRLATPTNE AENNAILAFV KQYNRYAYLG
110 120 130 140 150
IKVGDIADQF HYLDGTSVNY TNWGKNEPSG KGKEPCVEIY TDGHWNDKVC
160
NQYRLTVCEF
Length:160
Mass (Da):17,608
Last modified:July 26, 2011 - v1
Checksum:i5B52E5BD1E76AE1E
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01171061 Genomic DNA. No translation available.
AAMC01171062 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSXETT00000020548; ENSXETP00000020548; ENSXETG00000009325.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01171061 Genomic DNA. No translation available.
AAMC01171062 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliF7D669.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSXETT00000020548; ENSXETP00000020548; ENSXETG00000009325.

Organism-specific databases

XenbaseiXB-GENE-6065158. sftpa.

Phylogenomic databases

GeneTreeiENSGT00700000104102.
InParanoidiF7D669.
OMAiQYNRYAY.
OrthoDBiEOG7HXCVB.
TreeFamiTF330481.

Gene expression databases

BgeeiF7D669.

Family and domain databases

Gene3Di3.10.100.10. 1 hit.
InterProiIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR018378. C-type_lectin_CS.
IPR016187. C-type_lectin_fold.
[Graphical view]
PfamiPF00059. Lectin_C. 1 hit.
[Graphical view]
SMARTiSM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 1 hit.
PROSITEiPS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiF7D669_XENTR
AccessioniPrimary (citable) accession number: F7D669
Entry historyi
Integrated into UniProtKB/TrEMBL: July 26, 2011
Last sequence update: July 26, 2011
Last modified: March 3, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.