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Protein
Submitted name:

Uncharacterized protein

Gene

SH3KBP1

Organism
Equus caballus (Horse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. cell migration Source: Ensembl
  2. cytoskeleton organization Source: Ensembl
  3. regulation of cell shape Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SH3KBP1Imported
OrganismiEquus caballus (Horse)Imported
Taxonomic identifieri9796 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaPerissodactylaEquidaeEquus
ProteomesiUP000002281: Chromosome X

Subcellular locationi

GO - Cellular componenti

  1. cell-cell junction Source: Ensembl
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063594.
InParanoidiF7CTV5.
OMAiEDKEEHV.
OrthoDBiEOG7W41BC.
TreeFamiTF350191.

Family and domain databases

InterProiIPR001452. SH3_domain.
IPR013315. Spectrin_alpha_SH3.
[Graphical view]
PfamiPF14604. SH3_9. 2 hits.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
PR01887. SPECTRNALPHA.
SMARTiSM00326. SH3. 2 hits.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 2 hits.
PROSITEiPS50002. SH3. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

F7CTV5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
EIKKEMKKDP LSSKAPEKPL HEVSSGNALL SSETILRTNK RGERRRRRCQ
60 70 80 90 100
VAFSYLPQND DELELKVGDI IEVVGEVEEG WWEGVLNGKT GMFPSNFIKE
110 120 130 140 150
LSGESDDLGI SQDEQLSKSR PEALLPPASL LPFPAHGAKG KTTFEGTILY
160 170 180 190 200
RAAPGKTEGH RRYYSLRETT GSESDGGDSS STKSEGTNGT VATAAIQPKK
210 220 230 240 250
VKGVGFGDIF KDKPIKLRPR SIEVENDFLP VEKTIGKKLP PTTATPDSSK
260 270 280 290 300
TEMDSRTKSK DYCKVIFPYE AQNDDELTIK EGDIVTLINK DCIDVGWWEG
310 320 330 340 350
ELNGRRGVFP DNFVKLLPPD FEKEGNRPKK PPPPSAPVIK QGAGTTERKH
360 370 380 390 400
EIKKIPPERP ETLPNRTEEK ERPEREPKLD LQKPSVPAIP PKKPRPPKTN
410 420 430 440 450
SLSRPGALPP RRPERPVGPM THTRGDGPKI DLVGTSISGI LDKDLSDRSN
460 470 480 490 500
DIDLEGFDSV VSSTEKLSHP TTSRPKATGR RPPSQSLTSS SLSSPDIFDS
510 520 530 540 550
PSPEEEREEH VSLAHRGVDA SKKTSKTVTI SQVSDNKASL PPKPGTMAAG
560 570 580 590 600
GGGGAAPLSS VAPSPLSSSL GTAGHRANSP SLFGTEGKPK MEPVASSQAA
610 620 630 640 650
VEELRQVREL RSIIESMKDQ QKREFKQLLS ELDEEKKIRL RLQMEVNDIK

KALQSK
Length:656
Mass (Da):71,807
Last modified:July 27, 2011 - v1
Checksum:i166E51CF776A2F5A
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Genome annotation databases

EnsembliENSECAT00000019477; ENSECAP00000015942; ENSECAG00000017758.

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSECAT00000019477; ENSECAP00000015942; ENSECAG00000017758.

Phylogenomic databases

GeneTreeiENSGT00530000063594.
InParanoidiF7CTV5.
OMAiEDKEEHV.
OrthoDBiEOG7W41BC.
TreeFamiTF350191.

Family and domain databases

InterProiIPR001452. SH3_domain.
IPR013315. Spectrin_alpha_SH3.
[Graphical view]
PfamiPF14604. SH3_9. 2 hits.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
PR01887. SPECTRNALPHA.
SMARTiSM00326. SH3. 2 hits.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 2 hits.
PROSITEiPS50002. SH3. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence, comparative analysis, and population genetics of the domestic horse."
    Broad Institute Genome Sequencing Platform, Broad Institute Whole Genome Assembly Team
    Wade C.M., Giulotto E., Sigurdsson S., Zoli M., Gnerre S., Imsland F., Lear T.L., Adelson D.L., Bailey E., Bellone R.R., Bloecker H., Distl O., Edgar R.C., Garber M., Leeb T., Mauceli E., MacLeod J.N., Penedo M.C.T.
    , Raison J.M., Sharpe T., Vogel J., Andersson L., Antczak D.F., Biagi T., Binns M.M., Chowdhary B.P., Coleman S.J., Della Valle G., Fryc S., Guerin G., Hasegawa T., Hill E.W., Jurka J., Kiialainen A., Lindgren G., Liu J., Magnani E., Mickelson J.R., Murray J., Nergadze S.G., Onofrio R., Pedroni S., Piras M.F., Raudsepp T., Rocchi M., Roeed K.H., Ryder O.A., Searle S., Skow L., Swinburne J.E., Syvaenen A.C., Tozaki T., Valberg S.J., Vaudin M., White J.R., Zody M.C., Lander E.S., Lindblad-Toh K.
    Science 326:865-867(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ThoroughbredImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: ThoroughbredImported.

Entry informationi

Entry nameiF7CTV5_HORSE
AccessioniPrimary (citable) accession number: F7CTV5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: January 7, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.