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Protein
Submitted name:

Chloride channel protein 1

Gene

Clcn1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Chloride channel protein 1Imported
Gene namesi
Name:Clcn1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:88417. Clcn1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei89 – 111HelicalSequence analysisAdd BLAST23
Transmembranei132 – 154HelicalSequence analysisAdd BLAST23
Transmembranei174 – 194HelicalSequence analysisAdd BLAST21
Transmembranei206 – 225HelicalSequence analysisAdd BLAST20
Transmembranei237 – 261HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000029862.
ExpressionAtlasiF7C9S1. baseline and differential.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000119109.

Family and domain databases

Gene3Di1.10.3080.10. 1 hit.
InterProiView protein in InterPro
IPR014743. Cl-channel_core.
IPR001807. Cl-channel_volt-gated.
IPR002243. Cl_channel-1.
PfamiView protein in Pfam
PF00654. Voltage_CLC. 1 hit.
PRINTSiPR00762. CLCHANNEL.
PR01112. CLCHANNEL1.
SUPFAMiSSF81340. SSF81340. 1 hit.

Sequencei

Sequence statusi: Fragment.

F7C9S1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
XTSYGLPSEN GGLQHRPRKD MGPRHNAHPT QIYGHQKEQY SYKAQDGGMP
60 70 80 90 100
KKMGSSSTMD SLDEDHYSKC QDCVHRLGRV LRRKLGEDWI FLVLLGLLMA
110 120 130 140 150
LVSWCMDYVS AKSLQAYKWT YAQMKPSLPL QYLAWVTFPL ILILFSALFC
160 170 180 190 200
QLISPQAVGS GIPEMKTILR GVVLKEYLTL KAFVAKVVAL TAGLGSGIPV
210 220 230 240 250
GKEGPFVHIA SICAAVLSKF MSMFSGVYET VPGQLDLLVP ACAVGVGCYF
260
AAPDGVAAIL LH
Length:262
Mass (Da):28,640
Last modified:July 27, 2011 - v1
Checksum:i3B9CE2A85FFD52C4
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC153915 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000169024; ENSMUSP00000130968; ENSMUSG00000029862.

Similar proteinsi

Entry informationi

Entry nameiF7C9S1_MOUSE
AccessioniPrimary (citable) accession number: F7C9S1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: August 30, 2017
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported