Uncharacterized protein - Xenopus tropicalis (Western clawed frog)

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F7C8Z2 (F7C8Z2_XENTR) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 13. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSXETP00000018719

Gene names

Name:

thbs2 Ensembl ENSXETP00000018719

Organism

Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) [Reference proteome] Ensembl ENSXETP00000018719

Taxonomic identifier

8364 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Silurana

Protein attributes

Sequence length	1173 AA.
Sequence status	Fragment.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSXETP00000018719

Ontologies

Keywords
Domain	EGF-like domain SAAS SAAS001791 Repeat SAAS SAAS001791
PTM	Disulfide bond SAAS SAAS001791
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	cell adhesion Inferred from electronic annotation. Source: InterPro
Cellular_component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular_function	calcium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Experimental info

Non-terminal residue

Ensembl ENSXETP00000018719

Sequences

Sequence

Length

Mass (Da)

Tools

F7C8Z2 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 29ACBE7CF1A63A1E
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FASTA

1,173

131,343

        10         20         30         40         50         60 
ALKGEPGSLY LRHKCFSSRS NEEKEDETNF DLFEISNINK RTIGAKIFRG HESSSPAYRF 

        70         80         90        100        110        120 
LRFDHIPPIN NEKMKQIIEL MQQNEGFILT ATLKQDKNNR GTIISIEGPG ISNRLFELVS 

       130        140        150        160        170        180 
NGRANTLDLI YWVDGSQNVI SLEDVDLADS HWKNITVQLL GENFNLYVGC DLIDSFQLEE 

       190        200        210        220        230        240 
TFYEHLKDDN IKMFLAKGSI RENHFRGLLQ DVRLIFDVSV EDVLRKKGCQ LTHTGEVNAI 

       250        260        270        280        290        300 
SEKTEILHLS PMTMTEYVGQ KIDKQVDFCD HSCDELGNMF TELTRLRILV NNLLDNLQKV 

       310        320        330        340        350        360 
SEENQVLWEL IGPNKTLKNQ SMCWQDGRLF ADNEDWIVDS CTKCTCQQNS KTVCQQITCP 

       370        380        390        400        410        420 
PVHCASPTFN EGECCPMCFP MDSEAGWSPW SEWTECSVTC GSGTQQRGRS CDATSSSCEG 

       430        440        450        460        470        480 
SSIQTRTCNL GKCDNRIRQD GGWSHWSPWS ACSVTCGIGN ITRIRLCNSP KPQLGGKNCT 

       490        500        510        520        530        540 
GAGRETKQCE GIPCPINGKW GPWSPWSSCT VTCGGGLRER SRLCNNPKPQ YGGKKCGGEP 

       550        560        570        580        590        600 
KEKEMCNKQD CPIDGCLSNP CFPGAECNSY PDGSWSCGAC PVGFVGNGTF CEDIDECVLV 

       610        620        630        640        650        660 
SDTCFRLGGV HRCVNTDPGY HCLPCPPRYK GTQPFGVGIE VAKKDKQECE PVNPCKDKSH 

       670        680        690        700        710        720 
NCHKYAECIY IGHFSDPSYK CECRTGYAGD GIICGEDSDL DGWPNNNLVC AANATYHCVK 

       730        740        750        760        770        780 
DNCPLLPNSG QEDSIPPTIA TNCSKDDYNF HNPYKNDNCP LLYNPRQFDY DKDEVGDRCD 

       790        800        810        820        830        840 
NCVYVHNPAQ IDTDNNGEGD ACAADIDGDD ILNELDNCPY VYNTDQKDTD KDGVGDQCDN 

       850        860        870        880        890        900 
CPLMHNPDQT DVDNDLVGDQ CDNNEDIDED GYQNNLDNCP YIPNANQADH DKDGRGDACD 

       910        920        930        940        950        960 
SDDDNDGVPD DRDNCRLVYN PDQKDSDGDG RGDACKDDFD NDSIPDILDV CPENSDISET 

       970        980        990       1000       1010       1020 
DFRKFQMVPL DPKGTAQIDP NWVIRHQGKE LVQTANSDPG IAVEVYEFTL QANWFKDSHK 

      1030       1040       1050       1060       1070       1080 
ITYMALTLTH LPTTHMHILH WQSILENKGQ RFSTHNEGNR GTYLFTHKST LGAMSHLKTI 

      1090       1100       1110       1120       1130       1140 
KFQLQNIIND VKVFGHKPMQ TPVTLKIYTH FETRAVHIVS ILPYRVVVYE GKQIMADSGP 

      1150       1160       1170 
LYDKTYAGGR LGLFVFSQEM VYFSDLKYEC KGK

« Hide

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of the Western clawed frog Xenopus tropicalis." Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J., Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E., Detter J.C., Fletcher R., Gerhard D.S. Rokhsar D.S. Science 328:633-636(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (JUN-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAMC01001140 Genomic DNA. No translation available. AAMC01001141 Genomic DNA. No translation available. AAMC01001142 Genomic DNA. No translation available.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSXETT00000018719; ENSXETP00000018719; ENSXETG00000008550.
Organism-specific databases
Xenbase	XB-GENE-482462. thbs2.
Phylogenomic databases
GeneTree	ENSGT00550000074507.
OMA	TEKQVCE.
Family and domain databases
Gene3D	2.60.120.200. 1 hit.
InterPro	IPR008985. ConA-like_lec_gl_sf. IPR013320. ConA-like_subgrp. IPR000742. EG-like_dom. IPR001881. EGF-like_Ca-bd. IPR013032. EGF-like_CS. IPR024731. EGF_dom_MSP1-like. IPR001791. Laminin_G. IPR000884. Thrombospondin_1_rpt. IPR015455. Thrombospondin_2. IPR003367. Thrombospondin_3-like_rpt. IPR017897. Thrombospondin_3_rpt. IPR008859. Thrombospondin_C. IPR001007. VWF_C. [Graphical view]
PANTHER	PTHR10199:SF10. PTHR10199:SF10. 1 hit.
Pfam	PF12947. EGF_3. 1 hit. PF07645. EGF_CA. 1 hit. PF00090. TSP_1. 3 hits. PF02412. TSP_3. 5 hits. PF05735. TSP_C. 1 hit. PF00093. VWC. 1 hit. [Graphical view]
SMART	SM00181. EGF. 2 hits. SM00179. EGF_CA. 1 hit. SM00209. TSP1. 3 hits. SM00210. TSPN. 1 hit. SM00214. VWC. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 2 hits. SSF82895. TSP1. 3 hits.
PROSITE	PS01186. EGF_2. 1 hit. PS50026. EGF_3. 2 hits. PS50092. TSP1. 3 hits. PS51234. TSP3. 8 hits. PS51236. TSP_CTER. 1 hit. PS01208. VWFC_1. 1 hit. PS50184. VWFC_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F7C8Z2_XENTR

Accession

Primary (citable) accession number: F7C8Z2

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	March 6, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Experimental info

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Family and domain databases

Entry information