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Protein
Submitted name:

PQ loop repeat containing 1

Gene

PQLC1

Organism
Monodelphis domestica (Gray short-tailed opossum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
PQ loop repeat containing 1Imported
Gene namesi
Name:PQLC1Imported
OrganismiMonodelphis domestica (Gray short-tailed opossum)Imported
Taxonomic identifieri13616 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMetatheriaDidelphimorphiaDidelphidaeMonodelphis
Proteomesi
  • UP000002280 Componenti: Chromosome 3

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 41HelicalSequence analysisAdd BLAST22
Transmembranei53 – 75HelicalSequence analysisAdd BLAST23
Transmembranei81 – 99HelicalSequence analysisAdd BLAST19
Transmembranei147 – 166HelicalSequence analysisAdd BLAST20
Transmembranei233 – 255HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMODG00000011978.

Interactioni

Protein-protein interaction databases

STRINGi13616.ENSMODP00000015008.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2913. Eukaryota.
ENOG4111FM2. LUCA.
GeneTreeiENSGT00390000002381.
InParanoidiF7B9T8.
OMAiLYRNYQN.
OrthoDBiEOG091G0IP7.
TreeFamiTF313072.

Family and domain databases

InterProiView protein in InterPro
IPR006603. PQ-loop_rpt.
PfamiView protein in Pfam
PF04193. PQ-loop. 2 hits.
SMARTiView protein in SMART
SM00679. CTNS. 2 hits.

Sequencei

Sequence statusi: Complete.

F7B9T8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTFRMEADGL EWLFIPLHQI VSWGASGAMV FGGVVPYIPQ YRDIKRTQNA
60 70 80 90 100
EGFSTYVCLV LLVANILRIL FWFGRHFESP LLWQSIVMIF TMLLMLKLCT
110 120 130 140 150
EVRVTNELNL KRRSFAAADS KDEEIKVPPR RSYLDFDLHY FWHWSKFTDY
160 170 180 190 200
VQCVLTFTGV TGYITYLSLD SALFVETLGF LAVFTEAMLG VPQLYRNYQN
210 220 230 240 250
RSTEGMSIKM VLMWTSGDTF KTVYFILNQA PFQFSICGLL QVLVDMAILL
260 270
QVYLYTYYPQ KPASHAAHPV SAKAL
Length:275
Mass (Da):31,726
Last modified:January 9, 2013 - v2
Checksum:i65D2EC15ABE45A61
GO

Sequence databases

RefSeqiXP_001366377.2. XM_001366340.3.
XP_016287221.1. XM_016431735.1.

Genome annotation databases

EnsembliENSMODT00000015283; ENSMODP00000015008; ENSMODG00000011978.
GeneIDi100016889.
KEGGimdo:100016889.

Similar proteinsi

Entry informationi

Entry nameiF7B9T8_MONDO
AccessioniPrimary (citable) accession number: F7B9T8
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: January 9, 2013
Last modified: August 30, 2017
This is version 28 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported