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Protein
Submitted name:

Chloride channel protein 1

Gene

Clcn1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Chloride channel protein 1Imported
Gene namesi
Name:Clcn1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:88417. Clcn1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei85 – 107HelicalSequence analysisAdd BLAST23
Transmembranei128 – 150HelicalSequence analysisAdd BLAST23
Transmembranei170 – 190HelicalSequence analysisAdd BLAST21
Transmembranei202 – 221HelicalSequence analysisAdd BLAST20
Transmembranei233 – 256HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000029862.
ExpressionAtlasiF7A9J6. baseline and differential.

Structurei

3D structure databases

SMRiF7A9J6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000119109.

Family and domain databases

Gene3Di1.10.3080.10. 1 hit.
InterProiView protein in InterPro
IPR014743. Cl-channel_core.
IPR001807. Cl-channel_volt-gated.
IPR002243. Cl_channel-1.
PfamiView protein in Pfam
PF00654. Voltage_CLC. 1 hit.
PRINTSiPR00762. CLCHANNEL.
PR01112. CLCHANNEL1.
SUPFAMiSSF81340. SSF81340. 1 hit.

Sequencei

Sequence statusi: Fragment.

F7A9J6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GLPSENGGLQ HRPRKDMGPR HNAHPTQIYG HQKEQYSYKA QDGGMPKKMG
60 70 80 90 100
SSSTMDSLDE DHYSKCQDCV HRLGRVLRRK LGEDWIFLVL LGLLMALVSW
110 120 130 140 150
CMDYVSAKSL QAYKWTYAQM KPSLPLQYLA WVTFPLILIL FSALFCQLIS
160 170 180 190 200
PQAVGSGIPE MKTILRGVVL KEYLTLKAFV AKVVALTAGL GSGIPVGKEG
210 220 230 240 250
PFVHIASICA AVLSKFMSMF SGVYETVPGQ LDLLVPACAV GVGCYFAAPD

GAAILLH
Length:257
Mass (Da):28,078
Last modified:July 27, 2011 - v1
Checksum:i8275681934882A5E
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC153915 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000168660; ENSMUSP00000126045; ENSMUSG00000029862.

Similar proteinsi

Entry informationi

Entry nameiF7A9J6_MOUSE
AccessioniPrimary (citable) accession number: F7A9J6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 10, 2017
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported