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Protein
Submitted name:

Uncharacterized protein

Gene

NEU2

Organism
Equus caballus (Horse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-(2->3)-sialidase activity Source: Ensembl

GO - Biological processi

  1. ganglioside catabolic process Source: Ensembl
  2. oligosaccharide catabolic process Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:NEU2Imported
OrganismiEquus caballus (Horse)Imported
Taxonomic identifieri9796 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaPerissodactylaEquidaeEquus
ProteomesiUP000002281 Componenti: Chromosome 6

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000011171.
InParanoidiF6ZZS9.
KOiK12357.
OMAiQSMGTGP.
OrthoDBiEOG7MSMNP.
TreeFamiTF331063.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026945. Sialidase-2.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF6. PTHR10628:SF6. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

F6ZZS9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASCPILQKE KVFQSGAHAY RIPALLYLPQ QKTLLAFAEK RRDKRDEHAE
60 70 80 90 100
LIALRKGSYD VATHRVLWHA EEVVTQAQLE GHRSMNPSPL YDKKTGTLFL
110 120 130 140 150
FFISIPGQVS ERHQLHTRVN VTRLCQVTST DHGRSWSPAR DVTDSIIGSA
160 170 180 190 200
YKEWATFALG PGHCLQLHNE SQSLVVPAYA YRNLHPRHRP APFAVCFISH
210 220 230 240 250
DHGHTWQRGN FVAQDTLECQ VAEVGSTKQR VVYLNARSPL RARVQAESNN
260 270 280 290 300
DGLDFKEIQL VTKLAEPPQG CQGSIVSFPN PTVQSDFSDK WLLYTHPTDS
310 320 330 340 350
RQRSNLGVYL NKWPLAPTAW SEPTLLAKGS CAYSDLQSMG AGPDGSPQFA
360 370
CLYESNNYEE IIFLMFTLKQ AFPAEFLPQ
Length:379
Mass (Da):42,674
Last modified:July 26, 2011 - v1
Checksum:i1AD774EA4C344421
GO

Sequence databases

RefSeqiXP_001499172.1. XM_001499122.2.
XP_005610779.1. XM_005610722.1.

Genome annotation databases

EnsembliENSECAT00000020102; ENSECAP00000016487; ENSECAG00000018974.
GeneIDi100057378.
KEGGiecb:100057378.

Cross-referencesi

Sequence databases

RefSeqiXP_001499172.1. XM_001499122.2.
XP_005610779.1. XM_005610722.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSECAT00000020102; ENSECAP00000016487; ENSECAG00000018974.
GeneIDi100057378.
KEGGiecb:100057378.

Organism-specific databases

CTDi4759.

Phylogenomic databases

GeneTreeiENSGT00390000011171.
InParanoidiF6ZZS9.
KOiK12357.
OMAiQSMGTGP.
OrthoDBiEOG7MSMNP.
TreeFamiTF331063.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026945. Sialidase-2.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF6. PTHR10628:SF6. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence, comparative analysis, and population genetics of the domestic horse."
    Broad Institute Genome Sequencing Platform, Broad Institute Whole Genome Assembly Team
    Wade C.M., Giulotto E., Sigurdsson S., Zoli M., Gnerre S., Imsland F., Lear T.L., Adelson D.L., Bailey E., Bellone R.R., Bloecker H., Distl O., Edgar R.C., Garber M., Leeb T., Mauceli E., MacLeod J.N., Penedo M.C.T.
    , Raison J.M., Sharpe T., Vogel J., Andersson L., Antczak D.F., Biagi T., Binns M.M., Chowdhary B.P., Coleman S.J., Della Valle G., Fryc S., Guerin G., Hasegawa T., Hill E.W., Jurka J., Kiialainen A., Lindgren G., Liu J., Magnani E., Mickelson J.R., Murray J., Nergadze S.G., Onofrio R., Pedroni S., Piras M.F., Raudsepp T., Rocchi M., Roeed K.H., Ryder O.A., Searle S., Skow L., Swinburne J.E., Syvaenen A.C., Tozaki T., Valberg S.J., Vaudin M., White J.R., Zody M.C., Lander E.S., Lindblad-Toh K.
    Science 326:865-867(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ThoroughbredImported.
  2. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: ThoroughbredImported.

Entry informationi

Entry nameiF6ZZS9_HORSE
AccessioniPrimary (citable) accession number: F6ZZS9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 26, 2011
Last sequence update: July 26, 2011
Last modified: January 6, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.