F6ZPB0 (F6ZPB0_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein Prickle4 Ensembl ENSMUSP00000108924

Gene names

Name:

Prickle4 Ensembl ENSMUSP00000108924 MGI 2685785

Organism

Mus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000108924

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	329 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities	Contains 1 PET domain. SAAS SAAS010442 Contains 2 LIM zinc-binding domains. RuleBase RU000350
Caution	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000108924

Ontologies

Keywords
Domain	LIM domain RuleBase RU000350 SAAS SAAS010442 Repeat SAAS SAAS010442
Ligand	Metal-binding Zinc
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F6ZPB0 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: 4428010F9CC63E6D	FASTA	329	36,077
	10 20 30 40 50 60 VLPQAATCSS LGPPCLDINQ VSNWPGFRTL LQQLPPQDSD ERYCLALGEE ELAQLRLFCA 70 80 90 100 110 120 QRKQKSLGQG VARLLPPKLE GYTCKKCKKL LDPGEYGVFA ARAGEQSCWH RPCFACQACG 130 140 150 160 170 180 QGLINLIYFY HEGHLYCGRH HAELLRPRCP ACDQLIFSQR CTEAEGQRWH ENHFCCQDCA 190 200 210 220 230 240 GPLDGGRYAL PGGSPCCPSC FSKRYRSAGS SSVGVAEGQA SFEEEGPDPS VGWNRASSDD 250 260 270 280 290 300 KITSRAALLS AVPTLTLETL NGASKRQDRD GPQTPGSPIE DSPCPTCSSS SESEPEGFFF 310 320 GQRLPEPWKT PENLQADDRD ISRKHCTIC

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P. PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J Ensembl ENSMUSP00000108924.
[2]	Ensembl Submitted (JUN-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: C57BL/6J Ensembl ENSMUSP00000108924.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC139214 Genomic DNA. No translation available.
IPI	IPI00378254.
3D structure databases
ProteinModelPortal	F6ZPB0.
SMR	F6ZPB0. Positions 146-205.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSMUST00000113299; ENSMUSP00000108924; ENSMUSG00000096549.
Organism-specific databases
MGI	MGI:2685785. Prickle4.
Phylogenomic databases
GeneTree	ENSGT00550000074438.
Gene expression databases
ArrayExpress	F6ZPB0.
Bgee	F6ZPB0.
Family and domain databases
Gene3D	2.10.110.10. 2 hits.
InterPro	IPR010442. PET_domain. IPR001781. Znf_LIM. [Graphical view]
Pfam	PF00412. LIM. 2 hits. PF06297. PET. 1 hit. [Graphical view]
SMART	SM00132. LIM. 2 hits. [Graphical view]
PROSITE	PS00478. LIM_DOMAIN_1. 2 hits. PS50023. LIM_DOMAIN_2. 2 hits. PS51303. PET. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	35558783.
SOURCE	Search...

Entry information

Entry name

F6ZPB0_MOUSE

Accession

Primary (citable) accession number: F6ZPB0

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)