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Protein
Submitted name:

Nuclear pore complex protein Nup98-Nup96 isoform 1

Gene

NUP98

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Protein family/group databases

MEROPSiS59.001

Names & Taxonomyi

Protein namesi
Submitted name:
Nuclear pore complex protein Nup98-Nup96 isoform 1Imported
Gene namesi
Name:NUP98Imported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix
Proteomesi
  • UP000008225 Componenti: Chromosome 11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000028362

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini720 – 862Peptidase S59InterPro annotationAdd BLAST143

Phylogenomic databases

eggNOGiKOG0845 Eukaryota
ENOG410XPV4 LUCA
GeneTreeiENSGT00550000074799
OMAiPHKMQLM
OrthoDBiEOG091G00HN
TreeFamiTF343335

Family and domain databases

Gene3Di3.30.1610.10, 1 hit
InterProiView protein in InterPro
IPR037665 Nucleoporin_S59-like
IPR021967 Nup96
IPR037637 NUP98-NUP96
IPR007230 Peptidase_S59
IPR036903 Peptidase_S59_sf
PANTHERiPTHR23198 PTHR23198, 2 hits
PTHR23198:SF6 PTHR23198:SF6, 2 hits
PfamiView protein in Pfam
PF04096 Nucleoporin2, 1 hit
PF12110 Nup96, 1 hit
SUPFAMiSSF82215 SSF82215, 1 hit
PROSITEiView protein in PROSITE
PS51434 NUP_C, 1 hit

Sequencei

Sequence statusi: Complete.

F6ZP55-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFNKSFGTPF GGGTGGFGTT STFGQNTGFG TTSGGAFGTS AFGSSNNTGG
60 70 80 90 100
LFGNSQTKPG GLFGTNSFSQ PATSTSTGFG FGTSTGTSNS LFGTASTGTS
110 120 130 140 150
LFSSQNNAFA QNKPTGFGNF GTSTSSGGLF GTTNTTSNPF GSTSGSLFGP
160 170 180 190 200
SSFTAAPTGT TIKFNPPTGT DTMVKAGVST NISTKHQCIT AMKEYESKSL
210 220 230 240 250
EELRLEDYQA NRKGPQNQVG AGTTTGLFGS SPATSSATGL FSSSTTNSGF
260 270 280 290 300
AYGQNKTAFG TSTTGFGTNP GGLFGQQNQQ TTSLFSKPFG QATTTQNTGF
310 320 330 340 350
SFGNTSTLGQ PSTNTMGLFG VTQASQPGGL FGTATNTSTG TAFGTGTGLF
360 370 380 390 400
GQTNTGFGAV GSTLFGNNKL TTFGSSTTST PSFGTTSGGL FGFGTNTSGN
410 420 430 440 450
SIFGSKPAPG TLGTGLGAGF GTALGAGQAS LFGNSQPKIG GPLGTGAFGA
460 470 480 490 500
PGFNTTTATL GFGAPQVPVA LTDPNASAAQ QAVLQQHINS LTYSPFGDSP
510 520 530 540 550
LFRNPMSDPK KKEERLKPTN PAAQKALTTP THYKLTPRPA TRVRPKALQT
560 570 580 590 600
TGTAKSHLFD GLDDDEPSLA NGAFMPKKSI KKLVLKNLNN SSLFSPVNRD
610 620 630 640 650
SETLASPSEY PENGERFSFL SKPVDENHQQ DGDEDSLVSR FYTNPIAKPI
660 670 680 690 700
PQTPESAGNK HNSSSVDDTI VALNMRAALR NGLEGSSEET SFHDESLQDD
710 720 730 740 750
REEIENNSYH MHPAGIVLTK VGYYTIPSMD DLAKITNEKG ECIVSDFTIG
760 770 780 790 800
RKGYGSIYFE GDVNLTNLNL DDIVHIRRKE VVVYVDDNKK PPVGEGLNRK
810 820 830 840 850
AEVTLDGVWP TDKTSRCLIK SPDRLADINY EGRLEAVSRK QGAQFKEYRP
860 870 880 890 900
ETGSWVFKVS HFSKYGLQDS DEEEEEHPSK TSTKKLKTAP LPPAGQTAPF
910 920 930 940 950
QMALNGKPAP PPQSQSPEVE QLGRVVELDS DMVDITQEPV LDTMLEESMP
960 970 980 990 1000
EDQEPVSAST HIASSLGINP HVLQIMKASL LTEEEDIDMA LDQRFSRLPS
1010 1020 1030 1040 1050
KADTSQEICS PRLPISASHS SKTRSLVGGL LQSKFTSGAF LSPSASVQEC
1060 1070 1080 1090 1100
RTPRTASLIN IPSTSSWSVL PPLASVFTMP SPAPEVPLKT VGTRRQLGLV
1110 1120 1130 1140 1150
PLEKSVTYGK GKLLMDMALF MGRSFRVGWG PNWTLANSGE QLNGSHELEN
1160 1170 1180 1190 1200
HQIADSMEYG FLPNPVAVKS LTESPFKVHL EKLSLRQRKP DEDMKLYQTP
1210 1220 1230 1240 1250
LELKLKHSTV HVDELCPLIV PNPGVAVIHD YADWVKEASG DLPEAQIVKH
1260 1270 1280 1290 1300
WSLTWTLCEA LWGHLKELDS QLDEPNKYIQ ILERRRAFSR WLSHTATPQI
1310 1320 1330 1340 1350
EEEVSLTQKN SPVEAVFSYL TGKRISEACS LAQQSGDHRL ALLLSQFVGS
1360 1370 1380 1390 1400
QSIRELLTMQ LVDWHQLQAD CFIQDERLRI FALLAGKPVW QLSEQKQINV
1410 1420 1430 1440 1450
CSQLDWKRSL AIHLWYLLPP TASISRALNM YEEAFQNTSD SDRYACSPLP
1460 1470 1480 1490 1500
SYLEGSGSVI EEEQNSQTPL RDVCFHLLKL YSDRYYDLNQ LLEPRSITAD
1510 1520 1530 1540 1550
PLDYRLSWHL WEVLRALNYT HLSEQCEGVL QASYAGQLES EGLWEWAIFV
1560 1570 1580 1590 1600
LLHIDNSCIR EKAVRELLTR HCQLLETPEY WAKETFLTQK LCVPAEWIHE
1610 1620 1630 1640 1650
AKAVRAHMES DKHLEALYLF KAGHWNRCHK LIIRHLASDA IINEKYDYLK
1660 1670 1680 1690 1700
GFLEDLAPPE RSSLIQDWET SGLVYLDYIR VIDMLHRIQQ VDCSGYDLEQ
1710 1720 1730 1740 1750
LHIKVISLCS RIEQIQCYNA KDRLAQSDMA KRVANLLRVV LSLHHAPDTT
1760 1770 1780 1790
SDSTPDPQRV PLRLLAPHIG RLPMPEDYAM DELRSLTQSY LRELAVGSL
Length:1,799
Mass (Da):195,873
Last modified:July 27, 2011 - v1
Checksum:i6E7553C3BF76727D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACFV01116681 Genomic DNA No translation available.
ACFV01116682 Genomic DNA No translation available.
ACFV01116683 Genomic DNA No translation available.
ACFV01116684 Genomic DNA No translation available.
ACFV01116685 Genomic DNA No translation available.
ACFV01116686 Genomic DNA No translation available.
ACFV01116687 Genomic DNA No translation available.
ACFV01116688 Genomic DNA No translation available.
ACFV01116689 Genomic DNA No translation available.
ACFV01116690 Genomic DNA No translation available.
GAMT01003965 mRNA Translation: JAB07896.1
GAMS01003017 mRNA Translation: JAB20119.1
GAMQ01001177 mRNA Translation: JAB40674.1
RefSeqiXP_009005754.1, XM_009007506.2

Genome annotation databases

EnsembliENSCJAT00000029969; ENSCJAP00000028362; ENSCJAG00000015332
GeneIDi100414799

Similar proteinsi

Entry informationi

Entry nameiF6ZP55_CALJA
AccessioniPrimary (citable) accession number: F6ZP55
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: March 28, 2018
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health